Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 VAM7YGL212W 951 nt6.59□□□□□ -1.35
VPS13Q07878 STT3YGL022W 2157 nt6.59□□□□□ -1.35
VPS13Q07878 YJU3YKL094W 942 nt6.59□□□□□ -1.35
VPS13Q07878 IRC5YFR038W 2562 nt6.59□□□□□ -1.36
VPS13Q07878 YJR015WYJR015W 1533 nt6.58□□□□□ -1.36
VPS13Q07878 NUP84YDL116W 2181 nt6.58□□□□□ -1.36
VPS13Q07878 CCP1YKR066C 1086 nt6.58□□□□□ -1.36
VPS13Q07878 ATG33YLR356W 594 nt6.58□□□□□ -1.36
VPS13Q07878 MRPS5YBR251W 924 nt6.58□□□□□ -1.36
VPS13Q07878 MDH3YDL078C 1032 nt6.57□□□□□ -1.36
VPS13Q07878 MDH2YOL126C 1134 nt6.57□□□□□ -1.36
VPS13Q07878 MLC1YGL106W 450 nt6.56□□□□□ -1.36
VPS13Q07878 RTC2YBR147W 891 nt6.56□□□□□ -1.36
VPS13Q07878 PMA2YPL036W 2844 nt6.56□□□□□ -1.36
VPS13Q07878 YMR034CYMR034C 1305 nt6.56□□□□□ -1.36
VPS13Q07878 CAF40YNL288W 1122 nt6.56□□□□□ -1.36
VPS13Q07878 COT1YOR316C 1320 nt6.56□□□□□ -1.36
VPS13Q07878 TDP1YBR223C 1635 nt6.56□□□□□ -1.36
VPS13Q07878 YCL041CYCL041C 495 nt6.55□□□□□ -1.36
VPS13Q07878 FAL1YDR021W 1200 nt6.55□□□□□ -1.36
VPS13Q07878 MRPS16YPL013C 366 nt6.55□□□□□ -1.36
VPS13Q07878 ADE17YMR120C 1779 nt6.55□□□□□ -1.36
VPS13Q07878 IME2YJL106W 1938 nt6.55□□□□□ -1.36
VPS13Q07878 POX1YGL205W 2247 nt6.54□□□□□ -1.36
VPS13Q07878 RSC30YHR056C 2652 nt6.54□□□□□ -1.36
VPS13Q07878 PPT1YGR123C 1542 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)BtD(GUC)B 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)DtD(GUC)D 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)G1tD(GUC)G1 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)G2tD(GUC)G2 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)I1tD(GUC)I1 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)I2tD(GUC)I2 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)J1tD(GUC)J1 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)J2tD(GUC)J2 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)J3tD(GUC)J3 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)J4tD(GUC)J4 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)KtD(GUC)K 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)L1tD(GUC)L1 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)L2tD(GUC)L2 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)MtD(GUC)M 72 nt6.54□□□□□ -1.36
VPS13Q07878 tD(GUC)OtD(GUC)O 72 nt6.54□□□□□ -1.36
VPS13Q07878 RCL1YOL010W 1104 nt6.54□□□□□ -1.36
VPS13Q07878 CIS3YJL158C 684 nt6.53□□□□□ -1.36
VPS13Q07878 RFC4YOL094C 972 nt6.53□□□□□ -1.36
VPS13Q07878 YPL257WYPL257W 582 nt6.53□□□□□ -1.36
VPS13Q07878 PRI2YKL045W 1587 nt6.53□□□□□ -1.36
VPS13Q07878 GNP1YDR508C 1992 nt6.52□□□□□ -1.37
VPS13Q07878 HXT9YJL219W 1704 nt6.52□□□□□ -1.37
VPS13Q07878 IPK1YDR315C 846 nt6.51□□□□□ -1.37
VPS13Q07878 COX18YGR062C 951 nt6.51□□□□□ -1.37
VPS13Q07878 MDE1YJR024C 735 nt6.51□□□□□ -1.37
VPS13Q07878 GIR2YDR152W 798 nt6.51□□□□□ -1.37
VPS13Q07878 MEH1YKR007W 555 nt6.5□□□□□ -1.37
VPS13Q07878 YPR127WYPR127W 1038 nt6.5□□□□□ -1.37
VPS13Q07878 TKL2YBR117C 2046 nt6.5□□□□□ -1.37
VPS13Q07878 TRS31YDR472W 852 nt6.5□□□□□ -1.37
VPS13Q07878 RMD8YFR048W 1989 nt6.5□□□□□ -1.37
VPS13Q07878 CNE1YAL058W 1509 nt6.49□□□□□ -1.37
VPS13Q07878 QNS1YHR074W 2145 nt6.49□□□□□ -1.37
VPS13Q07878 NDC1YML031W 1968 nt6.49□□□□□ -1.37
VPS13Q07878 YDR109CYDR109C 2148 nt6.49□□□□□ -1.37
VPS13Q07878 BDF2YDL070W 1917 nt6.49□□□□□ -1.37
VPS13Q07878 PRC1YMR297W 1599 nt6.49□□□□□ -1.37
VPS13Q07878 YDL034WYDL034W 345 nt6.49□□□□□ -1.37
VPS13Q07878 ATG36YJL185C 882 nt6.49□□□□□ -1.37
VPS13Q07878 CDC23YHR166C 1881 nt6.49□□□□□ -1.37
VPS13Q07878 LDB16YCL005W 771 nt6.48□□□□□ -1.37
VPS13Q07878 YGR022CYGR022C 330 nt6.48□□□□□ -1.37
VPS13Q07878 HBS1YKR084C 1836 nt6.48□□□□□ -1.37
VPS13Q07878 SMK1YPR054W 1167 nt6.47□□□□□ -1.37
VPS13Q07878 GAA1YLR088W 1845 nt6.47□□□□□ -1.37
VPS13Q07878 PRO3YER023W 861 nt6.47□□□□□ -1.37
VPS13Q07878 YGR182CYGR182C 354 nt6.47□□□□□ -1.37
VPS13Q07878 MIX17YMR002W 471 nt6.47□□□□□ -1.37
VPS13Q07878 YBR230W-AYBR230W-A 201 nt6.47□□□□□ -1.37
VPS13Q07878 YCR047W-AYCR047W-A 207 nt6.46□□□□□ -1.37
VPS13Q07878 YKR018CYKR018C 2178 nt6.46□□□□□ -1.37
VPS13Q07878 CIN4YMR138W 576 nt6.46□□□□□ -1.38
VPS13Q07878 RUF23RUF23 254 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)BtG(GCC)B 71 nt6.45□□□□□ -1.38
VPS13Q07878 SUF16tG(GCC)C 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)D1tG(GCC)D1 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)D2tG(GCC)D2 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)EtG(GCC)E 71 nt6.45□□□□□ -1.38
VPS13Q07878 SUF20tG(GCC)F1 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)F2tG(GCC)F2 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)G1tG(GCC)G1 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)G2tG(GCC)G2 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)J1tG(GCC)J1 71 nt6.45□□□□□ -1.38
VPS13Q07878 SUF23tG(GCC)J2 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)MtG(GCC)M 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)O1tG(GCC)O1 71 nt6.45□□□□□ -1.38
VPS13Q07878 SUF17tG(GCC)O2 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)P1tG(GCC)P1 71 nt6.45□□□□□ -1.38
VPS13Q07878 tG(GCC)P2tG(GCC)P2 71 nt6.45□□□□□ -1.38
VPS13Q07878 PXL1YKR090W 2121 nt6.45□□□□□ -1.38
VPS13Q07878 ECM31YBR176W 939 nt6.45□□□□□ -1.38
VPS13Q07878 YTP1YNL237W 1380 nt6.44□□□□□ -1.38
VPS13Q07878 RAD24YER173W 1980 nt6.44□□□□□ -1.38
VPS13Q07878 ATP14YLR295C 375 nt6.44□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 39.7 ms