Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS3P61009 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS3P61009 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.63■□□□□ 0.73
SPCS3P61009 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS3P61009 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS3P61009 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SPCS3P61009 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPCS3P61009 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPCS3P61009 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPCS3P61009 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPCS3P61009 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPCS3P61009 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPCS3P61009 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPCS3P61009 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SPCS3P61009 AC010501.1-201ENST00000606270 1962 ntBASIC19.61■□□□□ 0.73
SPCS3P61009 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SPCS3P61009 AL162393.1-201ENST00000437852 946 ntBASIC19.61■□□□□ 0.73
SPCS3P61009 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.61■□□□□ 0.73
SPCS3P61009 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.61■□□□□ 0.73
SPCS3P61009 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPCS3P61009 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SPCS3P61009 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPCS3P61009 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.6■□□□□ 0.73
SPCS3P61009 AC021231.2-201ENST00000594613 730 ntBASIC19.6■□□□□ 0.73
SPCS3P61009 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPCS3P61009 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.6■□□□□ 0.73
SPCS3P61009 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPCS3P61009 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SPCS3P61009 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.6■□□□□ 0.73
SPCS3P61009 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPCS3P61009 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPCS3P61009 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SPCS3P61009 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.59■□□□□ 0.73
SPCS3P61009 DUX4L29-201ENST00000425409 679 ntBASIC19.59■□□□□ 0.73
SPCS3P61009 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPCS3P61009 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPCS3P61009 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPCS3P61009 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPCS3P61009 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPCS3P61009 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SPCS3P61009 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.57■□□□□ 0.72
SPCS3P61009 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPCS3P61009 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPCS3P61009 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.57■□□□□ 0.72
SPCS3P61009 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.56■□□□□ 0.72
SPCS3P61009 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPCS3P61009 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SPCS3P61009 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPCS3P61009 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SPCS3P61009 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.55■□□□□ 0.72
SPCS3P61009 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPCS3P61009 ERN1-208ENST00000606895 2068 ntBASIC19.55■□□□□ 0.72
SPCS3P61009 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPCS3P61009 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.55■□□□□ 0.72
SPCS3P61009 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.55■□□□□ 0.72
SPCS3P61009 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.55■□□□□ 0.72
SPCS3P61009 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPCS3P61009 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SPCS3P61009 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 AC093323.1-202ENST00000635031 2045 ntBASIC19.54■□□□□ 0.72
SPCS3P61009 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS3P61009 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPCS3P61009 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.53■□□□□ 0.72
SPCS3P61009 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SPCS3P61009 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SPCS3P61009 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SPCS3P61009 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPCS3P61009 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.52■□□□□ 0.72
SPCS3P61009 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.52■□□□□ 0.72
SPCS3P61009 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.52■□□□□ 0.72
SPCS3P61009 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPCS3P61009 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPCS3P61009 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPCS3P61009 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPCS3P61009 LINC00543-201ENST00000567234 1845 ntBASIC19.51■□□□□ 0.71
SPCS3P61009 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPCS3P61009 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPCS3P61009 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPCS3P61009 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPCS3P61009 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.5■□□□□ 0.71
SPCS3P61009 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPCS3P61009 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPCS3P61009 AC142381.3-201ENST00000568208 1670 ntBASIC19.49■□□□□ 0.71
SPCS3P61009 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS3P61009 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SPCS3P61009 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.49■□□□□ 0.71
SPCS3P61009 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.49■□□□□ 0.71
SPCS3P61009 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS3P61009 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.49■□□□□ 0.71
SPCS3P61009 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS3P61009 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS3P61009 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPCS3P61009 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPCS3P61009 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SPCS3P61009 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms