Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.34■■□□□ 1.17
SMIM11AP58511 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.33■■□□□ 1.17
SMIM11AP58511 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.33■■□□□ 1.17
SMIM11AP58511 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMIM11AP58511 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.33■■□□□ 1.16
SMIM11AP58511 AC142381.3-201ENST00000568208 1670 ntBASIC22.33■■□□□ 1.16
SMIM11AP58511 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMIM11AP58511 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMIM11AP58511 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMIM11AP58511 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMIM11AP58511 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMIM11AP58511 AC093323.1-202ENST00000635031 2045 ntBASIC22.31■■□□□ 1.16
SMIM11AP58511 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
SMIM11AP58511 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SMIM11AP58511 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMIM11AP58511 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SMIM11AP58511 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.31■■□□□ 1.16
SMIM11AP58511 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMIM11AP58511 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMIM11AP58511 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.3■■□□□ 1.16
SMIM11AP58511 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.3■■□□□ 1.16
SMIM11AP58511 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.3■■□□□ 1.16
SMIM11AP58511 LINC01971-201ENST00000617888 1048 ntBASIC22.3■■□□□ 1.16
SMIM11AP58511 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
SMIM11AP58511 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.3■■□□□ 1.16
SMIM11AP58511 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.3■■□□□ 1.16
SMIM11AP58511 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
SMIM11AP58511 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMIM11AP58511 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.29■■□□□ 1.16
SMIM11AP58511 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMIM11AP58511 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMIM11AP58511 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.29■■□□□ 1.16
SMIM11AP58511 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMIM11AP58511 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMIM11AP58511 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMIM11AP58511 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMIM11AP58511 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMIM11AP58511 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SMIM11AP58511 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMIM11AP58511 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMIM11AP58511 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.27■■□□□ 1.16
SMIM11AP58511 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMIM11AP58511 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMIM11AP58511 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMIM11AP58511 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
SMIM11AP58511 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.26■■□□□ 1.15
SMIM11AP58511 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMIM11AP58511 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
SMIM11AP58511 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMIM11AP58511 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L13-201ENST00000554103 1267 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L15-201ENST00000611059 1267 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L23-201ENST00000615195 1269 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L24-201ENST00000617576 1269 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L22-201ENST00000618238 1269 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L20-201ENST00000619712 1269 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L21-201ENST00000622058 1269 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L10-201ENST00000622460 1267 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 AC148477.6-201ENST00000623746 465 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 DUX4L25-201ENST00000624915 1269 ntBASIC22.25■■□□□ 1.15
SMIM11AP58511 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SMIM11AP58511 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SMIM11AP58511 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMIM11AP58511 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMIM11AP58511 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.24■■□□□ 1.15
SMIM11AP58511 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.24■■□□□ 1.15
SMIM11AP58511 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SMIM11AP58511 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMIM11AP58511 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMIM11AP58511 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SMIM11AP58511 MIR219A2-201ENST00000608502 1504 ntBASIC22.23■■□□□ 1.15
SMIM11AP58511 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.23■■□□□ 1.15
SMIM11AP58511 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM11AP58511 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM11AP58511 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMIM11AP58511 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.22■■□□□ 1.15
SMIM11AP58511 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.21■■□□□ 1.15
SMIM11AP58511 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM11AP58511 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM11AP58511 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.21■■□□□ 1.15
SMIM11AP58511 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM11AP58511 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM11AP58511 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM11AP58511 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.21■■□□□ 1.15
SMIM11AP58511 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM11AP58511 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM11AP58511 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.2■■□□□ 1.14
SMIM11AP58511 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM11AP58511 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM11AP58511 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM11AP58511 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.19■■□□□ 1.14
SMIM11AP58511 AC022211.4-201ENST00000625094 2161 ntBASIC22.19■■□□□ 1.14
SMIM11AP58511 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.19■■□□□ 1.14
SMIM11AP58511 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMIM11AP58511 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMIM11AP58511 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMIM11AP58511 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMIM11AP58511 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.18■■□□□ 1.14
SMIM11AP58511 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.18■■□□□ 1.14
SMIM11AP58511 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms