Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YNL120CYNL120C 486 nt6.73□□□□□ -1.33
YNL040WP53960 CTF19YPL018W 1110 nt6.73□□□□□ -1.33
YNL040WP53960 CCC2YDR270W 3015 nt6.73□□□□□ -1.33
YNL040WP53960 THI2YBR240C 1353 nt6.72□□□□□ -1.33
YNL040WP53960 SPG1YGR236C 288 nt6.72□□□□□ -1.33
YNL040WP53960 LYS1YIR034C 1122 nt6.72□□□□□ -1.33
YNL040WP53960 ICS3YJL077C 396 nt6.72□□□□□ -1.33
YNL040WP53960 YKL153WYKL153W 510 nt6.72□□□□□ -1.33
YNL040WP53960 YKR045CYKR045C 552 nt6.72□□□□□ -1.33
YNL040WP53960 OGG1YML060W 1131 nt6.72□□□□□ -1.33
YNL040WP53960 ISC1YER019W 1434 nt6.72□□□□□ -1.33
YNL040WP53960 HSM3YBR272C 1443 nt6.71□□□□□ -1.34
YNL040WP53960 GAL83YER027C 1254 nt6.71□□□□□ -1.34
YNL040WP53960 YHR218W-AYHR218W-A 318 nt6.71□□□□□ -1.34
YNL040WP53960 YBL112CYBL112C 318 nt6.71□□□□□ -1.34
YNL040WP53960 SCS22YBL091C-A 528 nt6.7□□□□□ -1.34
YNL040WP53960 MSY1YPL097W 1479 nt6.7□□□□□ -1.34
YNL040WP53960 ARE2YNR019W 1929 nt6.7□□□□□ -1.34
YNL040WP53960 SQT1YIR012W 1296 nt6.69□□□□□ -1.34
YNL040WP53960 YLR312CYLR312C 1197 nt6.69□□□□□ -1.34
YNL040WP53960 RUF23RUF23 254 nt6.69□□□□□ -1.34
YNL040WP53960 YNL200CYNL200C 741 nt6.68□□□□□ -1.34
YNL040WP53960 MSO1YNR049C 633 nt6.68□□□□□ -1.34
YNL040WP53960 YBR027CYBR027C 333 nt6.68□□□□□ -1.34
YNL040WP53960 TOS2YGR221C 1869 nt6.68□□□□□ -1.34
YNL040WP53960 YGR054WYGR054W 1929 nt6.68□□□□□ -1.34
YNL040WP53960 CRP1YHR146W 1398 nt6.68□□□□□ -1.34
YNL040WP53960 PAB1YER165W 1734 nt6.67□□□□□ -1.34
YNL040WP53960 RPP1YHR062C 882 nt6.67□□□□□ -1.34
YNL040WP53960 CIS3YJL158C 684 nt6.67□□□□□ -1.34
YNL040WP53960 MDE1YJR024C 735 nt6.67□□□□□ -1.34
YNL040WP53960 YLR361C-AYLR361C-A 297 nt6.67□□□□□ -1.34
YNL040WP53960 YMR252CYMR252C 405 nt6.67□□□□□ -1.34
YNL040WP53960 OPI7YDR360W 435 nt6.66□□□□□ -1.34
YNL040WP53960 SRL2YLR082C 1179 nt6.66□□□□□ -1.34
YNL040WP53960 YLR123CYLR123C 330 nt6.66□□□□□ -1.34
YNL040WP53960 LDB16YCL005W 771 nt6.66□□□□□ -1.34
YNL040WP53960 HMS2YJR147W 1077 nt6.65□□□□□ -1.34
YNL040WP53960 RAP1YNL216W 2484 nt6.65□□□□□ -1.35
YNL040WP53960 YDL085C-AYDL085C-A 207 nt6.64□□□□□ -1.35
YNL040WP53960 YDR187CYDR187C 519 nt6.64□□□□□ -1.35
YNL040WP53960 CUP2YGL166W 678 nt6.64□□□□□ -1.35
YNL040WP53960 TPK1YJL164C 1194 nt6.64□□□□□ -1.35
YNL040WP53960 PTC4YBR125C 1182 nt6.64□□□□□ -1.35
YNL040WP53960 UIP5YKR044W 1332 nt6.64□□□□□ -1.35
YNL040WP53960 IMA5YJL216C 1746 nt6.64□□□□□ -1.35
YNL040WP53960 CEF1YMR213W 1773 nt6.64□□□□□ -1.35
YNL040WP53960 AIM24YJR080C 1185 nt6.63□□□□□ -1.35
YNL040WP53960 GTO3YMR251W 1101 nt6.63□□□□□ -1.35
YNL040WP53960 PTC3YBL056W 1407 nt6.63□□□□□ -1.35
YNL040WP53960 ECM31YBR176W 939 nt6.63□□□□□ -1.35
YNL040WP53960 PEX3YDR329C 1326 nt6.62□□□□□ -1.35
YNL040WP53960 MDH1YKL085W 1005 nt6.62□□□□□ -1.35
YNL040WP53960 YLR184WYLR184W 348 nt6.62□□□□□ -1.35
YNL040WP53960 TAE1YBR261C 699 nt6.62□□□□□ -1.35
YNL040WP53960 SGF29YCL010C 780 nt6.62□□□□□ -1.35
YNL040WP53960 GEF1YJR040W 2340 nt6.62□□□□□ -1.35
YNL040WP53960 ZWF1YNL241C 1518 nt6.61□□□□□ -1.35
YNL040WP53960 NOG2YNR053C 1461 nt6.61□□□□□ -1.35
YNL040WP53960 YHR131CYHR131C 2553 nt6.61□□□□□ -1.35
YNL040WP53960 BIM1YER016W 1035 nt6.61□□□□□ -1.35
YNL040WP53960 TPO3YPR156C 1869 nt6.61□□□□□ -1.35
YNL040WP53960 OSW2YLR054C 2175 nt6.61□□□□□ -1.35
YNL040WP53960 GPI11YDR302W 660 nt6.6□□□□□ -1.35
YNL040WP53960 MEH1YKR007W 555 nt6.6□□□□□ -1.35
YNL040WP53960 DUS4YLR405W 1104 nt6.6□□□□□ -1.35
YNL040WP53960 MOD5YOR274W 1287 nt6.6□□□□□ -1.35
YNL040WP53960 PRY3YJL078C 2646 nt6.6□□□□□ -1.35
YNL040WP53960 CDC1YDR182W 1476 nt6.6□□□□□ -1.35
YNL040WP53960 YMR279CYMR279C 1623 nt6.59□□□□□ -1.35
YNL040WP53960 VPS61YDR136C 573 nt6.59□□□□□ -1.35
YNL040WP53960 RKI1YOR095C 777 nt6.59□□□□□ -1.35
YNL040WP53960 DRE2YKR071C 1047 nt6.58□□□□□ -1.36
YNL040WP53960 COQ3YOL096C 939 nt6.58□□□□□ -1.36
YNL040WP53960 RIO1YOR119C 1455 nt6.58□□□□□ -1.36
YNL040WP53960 PRP2YNR011C 2631 nt6.57□□□□□ -1.36
YNL040WP53960 PPT1YGR123C 1542 nt6.57□□□□□ -1.36
YNL040WP53960 MPC2YHR162W 390 nt6.57□□□□□ -1.36
YNL040WP53960 YMR122CYMR122C 375 nt6.57□□□□□ -1.36
YNL040WP53960 NTE1YML059C 5040 nt6.57□□□□□ -1.36
YNL040WP53960 PFK2YMR205C 2880 nt6.57□□□□□ -1.36
YNL040WP53960 SGE1YPR198W 1632 nt6.57□□□□□ -1.36
YNL040WP53960 TFG2YGR005C 1203 nt6.56□□□□□ -1.36
YNL040WP53960 COA1YIL157C 594 nt6.56□□□□□ -1.36
YNL040WP53960 FPR3YML074C 1236 nt6.56□□□□□ -1.36
YNL040WP53960 YPL136WYPL136W 369 nt6.56□□□□□ -1.36
YNL040WP53960 PGM1YKL127W 1713 nt6.56□□□□□ -1.36
YNL040WP53960 YIR042CYIR042C 711 nt6.55□□□□□ -1.36
YNL040WP53960 SMC5YOL034W 3282 nt6.54□□□□□ -1.36
YNL040WP53960 TKL2YBR117C 2046 nt6.54□□□□□ -1.36
YNL040WP53960 QCR8YJL166W 285 nt6.54□□□□□ -1.36
YNL040WP53960 TDH2YJR009C 999 nt6.54□□□□□ -1.36
YNL040WP53960 IMD1YAR073W 1212 nt6.54□□□□□ -1.36
YNL040WP53960 GLC8YMR311C 690 nt6.54□□□□□ -1.36
YNL040WP53960 YPR196WYPR196W 1413 nt6.53□□□□□ -1.36
YNL040WP53960 AMD2YDR242W 1650 nt6.53□□□□□ -1.36
YNL040WP53960 PPM1YDR435C 987 nt6.53□□□□□ -1.36
YNL040WP53960 YML6YML025C 861 nt6.53□□□□□ -1.36
YNL040WP53960 BSC4YNL269W 396 nt6.53□□□□□ -1.36
YNL040WP53960 CBK1YNL161W 2271 nt6.53□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms