Protein–RNA interactions for Protein: P40003

VAB2, Biogenesis of lysosome-related organelles complex 1 subunit VAB2, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAB2P40003 IRC11YOR013W 471 nt7.08□□□□□ -1.28
VAB2P40003 ECM31YBR176W 939 nt7.08□□□□□ -1.28
VAB2P40003 YBR241CYBR241C 1467 nt7.08□□□□□ -1.28
VAB2P40003 SEC24YIL109C 2781 nt7.07□□□□□ -1.28
VAB2P40003 ENB1YOL158C 1821 nt7.07□□□□□ -1.28
VAB2P40003 YPL250W-AYPL250W-A 288 nt7.07□□□□□ -1.28
VAB2P40003 RMD8YFR048W 1989 nt7.07□□□□□ -1.28
VAB2P40003 POX1YGL205W 2247 nt7.07□□□□□ -1.28
VAB2P40003 YDL085C-AYDL085C-A 207 nt7.06□□□□□ -1.28
VAB2P40003 HEM2YGL040C 1029 nt7.06□□□□□ -1.28
VAB2P40003 LDB16YCL005W 771 nt7.06□□□□□ -1.28
VAB2P40003 AFG2YLR397C 2343 nt7.06□□□□□ -1.28
VAB2P40003 ASK1YKL052C 879 nt7.05□□□□□ -1.28
VAB2P40003 MIA40YKL195W 1212 nt7.05□□□□□ -1.28
VAB2P40003 DFR1YOR236W 636 nt7.05□□□□□ -1.28
VAB2P40003 EDE1YBL047C 4146 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)BtG(GCC)B 71 nt7.04□□□□□ -1.28
VAB2P40003 SUF16tG(GCC)C 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)D1tG(GCC)D1 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)D2tG(GCC)D2 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)EtG(GCC)E 71 nt7.04□□□□□ -1.28
VAB2P40003 SUF20tG(GCC)F1 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)F2tG(GCC)F2 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)G1tG(GCC)G1 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)G2tG(GCC)G2 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)J1tG(GCC)J1 71 nt7.04□□□□□ -1.28
VAB2P40003 SUF23tG(GCC)J2 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)MtG(GCC)M 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)O1tG(GCC)O1 71 nt7.04□□□□□ -1.28
VAB2P40003 SUF17tG(GCC)O2 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)P1tG(GCC)P1 71 nt7.04□□□□□ -1.28
VAB2P40003 tG(GCC)P2tG(GCC)P2 71 nt7.04□□□□□ -1.28
VAB2P40003 RDN5-2RDN5-2 119 nt7.04□□□□□ -1.28
VAB2P40003 RDN5-3RDN5-3 119 nt7.04□□□□□ -1.28
VAB2P40003 RDN5-4RDN5-4 119 nt7.04□□□□□ -1.28
VAB2P40003 RDN5-5RDN5-5 119 nt7.04□□□□□ -1.28
VAB2P40003 CAF40YNL288W 1122 nt7.04□□□□□ -1.28
VAB2P40003 MRPS12YNR036C 462 nt7.04□□□□□ -1.28
VAB2P40003 SMC5YOL034W 3282 nt7.03□□□□□ -1.28
VAB2P40003 MSB3YNL293W 1902 nt7.03□□□□□ -1.28
VAB2P40003 CHA1YCL064C 1083 nt7.03□□□□□ -1.28
VAB2P40003 RPN11YFR004W 921 nt7.03□□□□□ -1.28
VAB2P40003 MTR3YGR158C 753 nt7.03□□□□□ -1.28
VAB2P40003 RPS5YJR123W 678 nt7.03□□□□□ -1.28
VAB2P40003 MEH1YKR007W 555 nt7.03□□□□□ -1.28
VAB2P40003 RPL10YLR075W 666 nt7.03□□□□□ -1.28
VAB2P40003 YLR112WYLR112W 420 nt7.03□□□□□ -1.28
VAB2P40003 PRB1YEL060C 1908 nt7.03□□□□□ -1.28
VAB2P40003 ICL1YER065C 1674 nt7.03□□□□□ -1.28
VAB2P40003 PRS2YER099C 957 nt7.01□□□□□ -1.29
VAB2P40003 SNF4YGL115W 969 nt7.01□□□□□ -1.29
VAB2P40003 RIX7YLL034C 2514 nt7.01□□□□□ -1.29
VAB2P40003 HEL1YKR017C 1656 nt7□□□□□ -1.29
VAB2P40003 YET3YDL072C 612 nt7□□□□□ -1.29
VAB2P40003 ECM14YHR132C 1293 nt7□□□□□ -1.29
VAB2P40003 RPS3YNL178W 723 nt7□□□□□ -1.29
VAB2P40003 NHA1YLR138W 2958 nt7□□□□□ -1.29
VAB2P40003 HST3YOR025W 1344 nt7□□□□□ -1.29
VAB2P40003 RPP1YHR062C 882 nt6.99□□□□□ -1.29
VAB2P40003 HEM1YDR232W 1647 nt6.98□□□□□ -1.29
VAB2P40003 HXT13YEL069C 1695 nt6.98□□□□□ -1.29
VAB2P40003 TOD6YBL054W 1578 nt6.98□□□□□ -1.29
VAB2P40003 YCR061WYCR061W 1896 nt6.98□□□□□ -1.29
VAB2P40003 MNS1YJR131W 1650 nt6.97□□□□□ -1.29
VAB2P40003 NUP84YDL116W 2181 nt6.97□□□□□ -1.29
VAB2P40003 DFM1YDR411C 1026 nt6.97□□□□□ -1.29
VAB2P40003 AIM2YAL049C 741 nt6.97□□□□□ -1.29
VAB2P40003 YNL120CYNL120C 486 nt6.97□□□□□ -1.29
VAB2P40003 BUG1YDL099W 1026 nt6.96□□□□□ -1.3
VAB2P40003 UGX2YDL169C 672 nt6.96□□□□□ -1.3
VAB2P40003 PEX13YLR191W 1161 nt6.96□□□□□ -1.3
VAB2P40003 JNM1YMR294W 1122 nt6.96□□□□□ -1.3
VAB2P40003 CDC19YAL038W 1503 nt6.96□□□□□ -1.3
VAB2P40003 UTP4YDR324C 2331 nt6.95□□□□□ -1.3
VAB2P40003 YDL129WYDL129W 876 nt6.95□□□□□ -1.3
VAB2P40003 GON7YJL184W 372 nt6.95□□□□□ -1.3
VAB2P40003 RGD2YFL047W 2145 nt6.95□□□□□ -1.3
VAB2P40003 SPO7YAL009W 780 nt6.94□□□□□ -1.3
VAB2P40003 GCN3YKR026C 918 nt6.94□□□□□ -1.3
VAB2P40003 YMR253CYMR253C 1245 nt6.94□□□□□ -1.3
VAB2P40003 YNL040WYNL040W 1371 nt6.94□□□□□ -1.3
VAB2P40003 YER137CYER137C 447 nt6.93□□□□□ -1.3
VAB2P40003 RFS1YBR052C 633 nt6.93□□□□□ -1.3
VAB2P40003 HBN1YCL026C-B 582 nt6.93□□□□□ -1.3
VAB2P40003 ISN1YOR155C 1353 nt6.93□□□□□ -1.3
VAB2P40003 MCH2YKL221W 1422 nt6.93□□□□□ -1.3
VAB2P40003 ADE12YNL220W 1302 nt6.92□□□□□ -1.3
VAB2P40003 AMD2YDR242W 1650 nt6.91□□□□□ -1.3
VAB2P40003 LDS1YAL018C 978 nt6.91□□□□□ -1.3
VAB2P40003 BRL1YHR036W 1416 nt6.91□□□□□ -1.3
VAB2P40003 ILV1YER086W 1731 nt6.9□□□□□ -1.3
VAB2P40003 FRE5YOR384W 2085 nt6.9□□□□□ -1.3
VAB2P40003 RHB1YCR027C 630 nt6.9□□□□□ -1.3
VAB2P40003 ERS1YCR075C 783 nt6.9□□□□□ -1.3
VAB2P40003 YDL119CYDL119C 924 nt6.9□□□□□ -1.3
VAB2P40003 YPT1YFL038C 621 nt6.9□□□□□ -1.3
VAB2P40003 ARC35YNR035C 1029 nt6.9□□□□□ -1.3
VAB2P40003 YDR415CYDR415C 1125 nt6.89□□□□□ -1.31
VAB2P40003 CBP4YGR174C 513 nt6.89□□□□□ -1.31
VAB2P40003 RPR2YIR015W 435 nt6.89□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 24 ms