Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SDHAP31040 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDHAP31040 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SDHAP31040 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.82■■□□□ 1.08
SDHAP31040 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDHAP31040 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDHAP31040 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDHAP31040 MIR3648-2-201ENST00000581792 180 ntBASIC21.81■■□□□ 1.08
SDHAP31040 MIR3648-1-201ENST00000615959 180 ntBASIC21.81■■□□□ 1.08
SDHAP31040 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.81■■□□□ 1.08
SDHAP31040 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.81■■□□□ 1.08
SDHAP31040 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDHAP31040 ERN1-208ENST00000606895 2068 ntBASIC21.81■■□□□ 1.08
SDHAP31040 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDHAP31040 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDHAP31040 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.8■■□□□ 1.08
SDHAP31040 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.8■■□□□ 1.08
SDHAP31040 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDHAP31040 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDHAP31040 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDHAP31040 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDHAP31040 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.79■■□□□ 1.08
SDHAP31040 AL359504.2-201ENST00000605506 1601 ntBASIC21.79■■□□□ 1.08
SDHAP31040 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHAP31040 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SDHAP31040 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SDHAP31040 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SDHAP31040 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHAP31040 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHAP31040 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDHAP31040 AC126177.7-201ENST00000547904 679 ntBASIC21.77■■□□□ 1.08
SDHAP31040 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.77■■□□□ 1.08
SDHAP31040 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SDHAP31040 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.77■■□□□ 1.08
SDHAP31040 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.77■■□□□ 1.08
SDHAP31040 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.77■■□□□ 1.08
SDHAP31040 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDHAP31040 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHAP31040 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHAP31040 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SDHAP31040 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SDHAP31040 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.75■■□□□ 1.07
SDHAP31040 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SDHAP31040 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDHAP31040 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SDHAP31040 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.74■■□□□ 1.07
SDHAP31040 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHAP31040 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHAP31040 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.74■■□□□ 1.07
SDHAP31040 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.74■■□□□ 1.07
SDHAP31040 AC016575.1-201ENST00000607026 382 ntBASIC21.74■■□□□ 1.07
SDHAP31040 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SDHAP31040 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SDHAP31040 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHAP31040 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHAP31040 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHAP31040 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.73■■□□□ 1.07
SDHAP31040 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHAP31040 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHAP31040 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SDHAP31040 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.72■■□□□ 1.07
SDHAP31040 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SDHAP31040 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.72■■□□□ 1.07
SDHAP31040 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHAP31040 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SDHAP31040 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHAP31040 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDHAP31040 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.71■■□□□ 1.07
SDHAP31040 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SDHAP31040 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SDHAP31040 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDHAP31040 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDHAP31040 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SDHAP31040 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SDHAP31040 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SDHAP31040 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDHAP31040 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SDHAP31040 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SDHAP31040 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.68■■□□□ 1.06
SDHAP31040 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDHAP31040 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.68■■□□□ 1.06
SDHAP31040 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SDHAP31040 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDHAP31040 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.67■■□□□ 1.06
SDHAP31040 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SDHAP31040 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDHAP31040 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDHAP31040 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms