Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H1DP16402 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H1DP16402 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HIST1H1DP16402 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST1H1DP16402 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1DP16402 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1DP16402 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1DP16402 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1DP16402 AL162393.1-201ENST00000437852 946 ntBASIC20.58■□□□□ 0.89
HIST1H1DP16402 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.58■□□□□ 0.89
HIST1H1DP16402 AC021231.2-201ENST00000594613 730 ntBASIC20.58■□□□□ 0.89
HIST1H1DP16402 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H1DP16402 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H1DP16402 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H1DP16402 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H1DP16402 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.58■□□□□ 0.88
HIST1H1DP16402 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1DP16402 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HIST1H1DP16402 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1DP16402 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HIST1H1DP16402 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1DP16402 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1DP16402 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1DP16402 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1DP16402 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1DP16402 AC022211.4-201ENST00000625094 2161 ntBASIC20.56■□□□□ 0.88
HIST1H1DP16402 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.56■□□□□ 0.88
HIST1H1DP16402 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1DP16402 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HIST1H1DP16402 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HIST1H1DP16402 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1DP16402 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H1DP16402 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H1DP16402 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1DP16402 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1DP16402 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1DP16402 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H1DP16402 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1DP16402 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1DP16402 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1DP16402 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST1H1DP16402 AC138932.3-201ENST00000567634 1902 ntBASIC20.54■□□□□ 0.88
HIST1H1DP16402 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HIST1H1DP16402 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1DP16402 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1DP16402 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST1H1DP16402 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.53■□□□□ 0.88
HIST1H1DP16402 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST1H1DP16402 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
HIST1H1DP16402 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H1DP16402 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.52■□□□□ 0.88
HIST1H1DP16402 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST1H1DP16402 DUX4L29-201ENST00000425409 679 ntBASIC20.52■□□□□ 0.88
HIST1H1DP16402 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HIST1H1DP16402 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H1DP16402 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HIST1H1DP16402 AC096887.2-201ENST00000623443 1957 ntBASIC20.52■□□□□ 0.87
HIST1H1DP16402 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H1DP16402 AL139125.2-201ENST00000623134 1869 ntBASIC20.51■□□□□ 0.87
HIST1H1DP16402 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H1DP16402 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H1DP16402 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H1DP16402 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.51■□□□□ 0.87
HIST1H1DP16402 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H1DP16402 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H1DP16402 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H1DP16402 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.5■□□□□ 0.87
HIST1H1DP16402 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H1DP16402 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H1DP16402 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.49■□□□□ 0.87
HIST1H1DP16402 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
HIST1H1DP16402 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HIST1H1DP16402 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H1DP16402 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.48■□□□□ 0.87
HIST1H1DP16402 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HIST1H1DP16402 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST1H1DP16402 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H1DP16402 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H1DP16402 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST1H1DP16402 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H1DP16402 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H1DP16402 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H1DP16402 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST1H1DP16402 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H1DP16402 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H1DP16402 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HIST1H1DP16402 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST1H1DP16402 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST1H1DP16402 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HIST1H1DP16402 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HIST1H1DP16402 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H1DP16402 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H1DP16402 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST1H1DP16402 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST1H1DP16402 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
HIST1H1DP16402 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HIST1H1DP16402 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST1H1DP16402 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST1H1DP16402 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H1DP16402 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms