Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBCP0CG48 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBCP0CG48 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBCP0CG48 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.25■□□□□ 0.99
UBCP0CG48 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBCP0CG48 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBCP0CG48 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBCP0CG48 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBCP0CG48 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
UBCP0CG48 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.24■□□□□ 0.99
UBCP0CG48 AC148477.6-201ENST00000623746 465 ntBASIC21.24■□□□□ 0.99
UBCP0CG48 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBCP0CG48 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
UBCP0CG48 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBCP0CG48 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBCP0CG48 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBCP0CG48 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBCP0CG48 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBCP0CG48 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.23■□□□□ 0.99
UBCP0CG48 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBCP0CG48 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
UBCP0CG48 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBCP0CG48 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
UBCP0CG48 MIR219A2-201ENST00000608502 1504 ntBASIC21.23■□□□□ 0.99
UBCP0CG48 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBCP0CG48 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
UBCP0CG48 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBCP0CG48 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.22■□□□□ 0.99
UBCP0CG48 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBCP0CG48 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
UBCP0CG48 ERN1-208ENST00000606895 2068 ntBASIC21.22■□□□□ 0.99
UBCP0CG48 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBCP0CG48 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.21■□□□□ 0.99
UBCP0CG48 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.21■□□□□ 0.99
UBCP0CG48 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBCP0CG48 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBCP0CG48 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
UBCP0CG48 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBCP0CG48 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBCP0CG48 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
UBCP0CG48 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBCP0CG48 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBCP0CG48 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBCP0CG48 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBCP0CG48 RPS2P35-201ENST00000443417 897 ntBASIC21.19■□□□□ 0.98
UBCP0CG48 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.19■□□□□ 0.98
UBCP0CG48 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
UBCP0CG48 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.19■□□□□ 0.98
UBCP0CG48 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UBCP0CG48 DUX4L11-201ENST00000611504 1267 ntBASIC21.19■□□□□ 0.98
UBCP0CG48 DUX4L12-201ENST00000614593 1267 ntBASIC21.19■□□□□ 0.98
UBCP0CG48 DUX4L14-201ENST00000621227 1267 ntBASIC21.19■□□□□ 0.98
UBCP0CG48 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBCP0CG48 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBCP0CG48 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.18■□□□□ 0.98
UBCP0CG48 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
UBCP0CG48 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBCP0CG48 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBCP0CG48 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
UBCP0CG48 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBCP0CG48 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.17■□□□□ 0.98
UBCP0CG48 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBCP0CG48 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBCP0CG48 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
UBCP0CG48 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBCP0CG48 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.17■□□□□ 0.98
UBCP0CG48 AC093323.1-202ENST00000635031 2045 ntBASIC21.17■□□□□ 0.98
UBCP0CG48 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
UBCP0CG48 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.16■□□□□ 0.98
UBCP0CG48 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.16■□□□□ 0.98
UBCP0CG48 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBCP0CG48 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBCP0CG48 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBCP0CG48 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBCP0CG48 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBCP0CG48 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.15■□□□□ 0.98
UBCP0CG48 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.15■□□□□ 0.98
UBCP0CG48 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBCP0CG48 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBCP0CG48 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBCP0CG48 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBCP0CG48 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBCP0CG48 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBCP0CG48 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBCP0CG48 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.14■□□□□ 0.97
UBCP0CG48 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBCP0CG48 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBCP0CG48 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
UBCP0CG48 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBCP0CG48 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.13■□□□□ 0.97
UBCP0CG48 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBCP0CG48 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBCP0CG48 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBCP0CG48 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.13■□□□□ 0.97
UBCP0CG48 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBCP0CG48 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 AL359258.2-201ENST00000564063 1566 ntBASIC21.12■□□□□ 0.97
UBCP0CG48 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms