Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC3P02656 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
APOC3P02656 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC3P02656 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOC3P02656 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
APOC3P02656 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APOC3P02656 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC3P02656 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC3P02656 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC3P02656 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
APOC3P02656 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC3P02656 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC3P02656 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
APOC3P02656 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC3P02656 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOC3P02656 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC3P02656 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOC3P02656 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC3P02656 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC3P02656 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
APOC3P02656 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.67■□□□□ 0.74
APOC3P02656 AP004833.2-201ENST00000532228 1454 ntBASIC19.67■□□□□ 0.74
APOC3P02656 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC3P02656 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC3P02656 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC3P02656 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
APOC3P02656 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.66■□□□□ 0.74
APOC3P02656 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOC3P02656 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.65■□□□□ 0.74
APOC3P02656 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
APOC3P02656 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APOC3P02656 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
APOC3P02656 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
APOC3P02656 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APOC3P02656 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOC3P02656 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOC3P02656 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOC3P02656 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.63■□□□□ 0.73
APOC3P02656 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.63■□□□□ 0.73
APOC3P02656 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
APOC3P02656 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC3P02656 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
APOC3P02656 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
APOC3P02656 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
APOC3P02656 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC3P02656 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
APOC3P02656 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
APOC3P02656 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.62■□□□□ 0.73
APOC3P02656 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC3P02656 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC3P02656 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC3P02656 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC3P02656 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
APOC3P02656 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
APOC3P02656 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.61■□□□□ 0.73
APOC3P02656 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC3P02656 AC138932.3-201ENST00000567634 1902 ntBASIC19.61■□□□□ 0.73
APOC3P02656 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC3P02656 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.6■□□□□ 0.73
APOC3P02656 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC3P02656 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
APOC3P02656 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
APOC3P02656 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC3P02656 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC3P02656 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC3P02656 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC3P02656 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APOC3P02656 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.59■□□□□ 0.73
APOC3P02656 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC3P02656 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.59■□□□□ 0.73
APOC3P02656 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APOC3P02656 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.58■□□□□ 0.73
APOC3P02656 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APOC3P02656 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APOC3P02656 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.58■□□□□ 0.72
APOC3P02656 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC3P02656 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC3P02656 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC3P02656 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOC3P02656 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.57■□□□□ 0.72
APOC3P02656 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOC3P02656 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOC3P02656 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC3P02656 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC3P02656 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APOC3P02656 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC3P02656 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.56■□□□□ 0.72
APOC3P02656 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
APOC3P02656 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC3P02656 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.55■□□□□ 0.72
APOC3P02656 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
APOC3P02656 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms