Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DUX4L9-201ENST00000449051 1259 ntBASIC25.18■■□□□ 1.62
TSPAN3O60637 SPCS2P3-201ENST00000500401 656 ntBASIC25.18■■□□□ 1.62
TSPAN3O60637 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TSPAN3O60637 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TSPAN3O60637 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
TSPAN3O60637 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TSPAN3O60637 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
TSPAN3O60637 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.17■■□□□ 1.62
TSPAN3O60637 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TSPAN3O60637 AC142472.1-201ENST00000612013 1741 ntBASIC25.17■■□□□ 1.62
TSPAN3O60637 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.16■■□□□ 1.62
TSPAN3O60637 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TSPAN3O60637 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.16■■□□□ 1.62
TSPAN3O60637 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.16■■□□□ 1.62
TSPAN3O60637 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TSPAN3O60637 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TSPAN3O60637 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TSPAN3O60637 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.15■■□□□ 1.62
TSPAN3O60637 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
TSPAN3O60637 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TSPAN3O60637 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
TSPAN3O60637 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
TSPAN3O60637 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TSPAN3O60637 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.14■■□□□ 1.62
TSPAN3O60637 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
TSPAN3O60637 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
TSPAN3O60637 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
TSPAN3O60637 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.14■■□□□ 1.61
TSPAN3O60637 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TSPAN3O60637 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
TSPAN3O60637 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TSPAN3O60637 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
TSPAN3O60637 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.13■■□□□ 1.61
TSPAN3O60637 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TSPAN3O60637 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.12■■□□□ 1.61
TSPAN3O60637 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.12■■□□□ 1.61
TSPAN3O60637 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.12■■□□□ 1.61
TSPAN3O60637 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.12■■□□□ 1.61
TSPAN3O60637 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.12■■□□□ 1.61
TSPAN3O60637 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TSPAN3O60637 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TSPAN3O60637 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TSPAN3O60637 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TSPAN3O60637 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TSPAN3O60637 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TSPAN3O60637 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
TSPAN3O60637 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TSPAN3O60637 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
TSPAN3O60637 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
TSPAN3O60637 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.1■■□□□ 1.61
TSPAN3O60637 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TSPAN3O60637 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TSPAN3O60637 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.1■■□□□ 1.61
TSPAN3O60637 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TSPAN3O60637 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.09■■□□□ 1.61
TSPAN3O60637 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.09■■□□□ 1.61
TSPAN3O60637 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
TSPAN3O60637 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
TSPAN3O60637 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
TSPAN3O60637 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TSPAN3O60637 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TSPAN3O60637 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.08■■□□□ 1.61
TSPAN3O60637 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TSPAN3O60637 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TSPAN3O60637 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TSPAN3O60637 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
TSPAN3O60637 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.07■■□□□ 1.6
TSPAN3O60637 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TSPAN3O60637 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TSPAN3O60637 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.07■■□□□ 1.6
TSPAN3O60637 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.07■■□□□ 1.6
TSPAN3O60637 AC018755.3-202ENST00000596210 929 ntBASIC25.07■■□□□ 1.6
TSPAN3O60637 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TSPAN3O60637 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TSPAN3O60637 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TSPAN3O60637 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.06■■□□□ 1.6
TSPAN3O60637 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.06■■□□□ 1.6
TSPAN3O60637 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TSPAN3O60637 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TSPAN3O60637 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TSPAN3O60637 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TSPAN3O60637 MIR6765-201ENST00000614092 87 ntBASIC25.05■■□□□ 1.6
TSPAN3O60637 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.05■■□□□ 1.6
TSPAN3O60637 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TSPAN3O60637 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms