Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.97■■□□□ 1.75
TBC1D4O60343 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.97■■□□□ 1.75
TBC1D4O60343 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
TBC1D4O60343 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TBC1D4O60343 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
TBC1D4O60343 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TBC1D4O60343 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TBC1D4O60343 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
TBC1D4O60343 AC010980.1-201ENST00000587192 1142 ntBASIC25.95■■□□□ 1.74
TBC1D4O60343 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TBC1D4O60343 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
TBC1D4O60343 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.94■■□□□ 1.74
TBC1D4O60343 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.94■■□□□ 1.74
TBC1D4O60343 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D4O60343 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D4O60343 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D4O60343 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.93■■□□□ 1.74
TBC1D4O60343 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.93■■□□□ 1.74
TBC1D4O60343 PVT1_1.1-201ENST00000615125 194 ntBASIC25.93■■□□□ 1.74
TBC1D4O60343 BX255925.1-201ENST00000566954 1854 ntBASIC25.93■■□□□ 1.74
TBC1D4O60343 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D4O60343 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D4O60343 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D4O60343 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D4O60343 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D4O60343 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D4O60343 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.92■■□□□ 1.74
TBC1D4O60343 BHLHE23-202ENST00000612929 1109 ntBASIC25.92■■□□□ 1.74
TBC1D4O60343 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.91■■□□□ 1.74
TBC1D4O60343 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D4O60343 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D4O60343 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D4O60343 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.91■■□□□ 1.74
TBC1D4O60343 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D4O60343 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.9■■□□□ 1.74
TBC1D4O60343 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
TBC1D4O60343 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.9■■□□□ 1.74
TBC1D4O60343 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.9■■□□□ 1.74
TBC1D4O60343 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.9■■□□□ 1.74
TBC1D4O60343 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D4O60343 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D4O60343 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D4O60343 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TBC1D4O60343 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.89■■□□□ 1.74
TBC1D4O60343 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.89■■□□□ 1.74
TBC1D4O60343 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TBC1D4O60343 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TBC1D4O60343 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.89■■□□□ 1.74
TBC1D4O60343 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.89■■□□□ 1.74
TBC1D4O60343 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
TBC1D4O60343 AC139795.1-202ENST00000500444 432 ntBASIC25.88■■□□□ 1.73
TBC1D4O60343 AC103834.1-201ENST00000520383 144 ntBASIC25.88■■□□□ 1.73
TBC1D4O60343 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.88■■□□□ 1.73
TBC1D4O60343 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D4O60343 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
TBC1D4O60343 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D4O60343 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D4O60343 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
TBC1D4O60343 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.87■■□□□ 1.73
TBC1D4O60343 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.87■■□□□ 1.73
TBC1D4O60343 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D4O60343 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.86■■□□□ 1.73
TBC1D4O60343 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D4O60343 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D4O60343 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D4O60343 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.85■■□□□ 1.73
TBC1D4O60343 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
TBC1D4O60343 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TBC1D4O60343 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.85■■□□□ 1.73
TBC1D4O60343 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TBC1D4O60343 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D4O60343 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.83■■□□□ 1.73
TBC1D4O60343 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TBC1D4O60343 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.83■■□□□ 1.73
TBC1D4O60343 AL451085.2-201ENST00000605085 799 ntBASIC25.83■■□□□ 1.73
TBC1D4O60343 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
TBC1D4O60343 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.83■■□□□ 1.73
TBC1D4O60343 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D4O60343 AC142086.6-201ENST00000621154 1765 ntBASIC25.82■■□□□ 1.72
TBC1D4O60343 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D4O60343 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D4O60343 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D4O60343 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TBC1D4O60343 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.82■■□□□ 1.72
TBC1D4O60343 AC087393.1-201ENST00000582896 145 ntBASIC25.82■■□□□ 1.72
TBC1D4O60343 AC142472.1-201ENST00000612013 1741 ntBASIC25.82■■□□□ 1.72
TBC1D4O60343 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.81■■□□□ 1.72
TBC1D4O60343 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.81■■□□□ 1.72
TBC1D4O60343 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TBC1D4O60343 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
TBC1D4O60343 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D4O60343 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.8■■□□□ 1.72
TBC1D4O60343 MIR4508-201ENST00000584178 70 ntBASIC25.8■■□□□ 1.72
TBC1D4O60343 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms