Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH17O14917 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH17O14917 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH17O14917 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDH17O14917 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH17O14917 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH17O14917 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH17O14917 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH17O14917 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH17O14917 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDH17O14917 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH17O14917 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDH17O14917 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH17O14917 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDH17O14917 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH17O14917 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH17O14917 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDH17O14917 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDH17O14917 AC012354.3-201ENST00000623734 483 ntBASIC23.15■■□□□ 1.3
PCDH17O14917 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH17O14917 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH17O14917 WHAMMP3-201ENST00000611636 1609 ntBASIC23.15■■□□□ 1.3
PCDH17O14917 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH17O14917 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH17O14917 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
PCDH17O14917 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH17O14917 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH17O14917 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH17O14917 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDH17O14917 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH17O14917 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PCDH17O14917 MIR3960-201ENST00000583311 91 ntBASIC23.14■■□□□ 1.29
PCDH17O14917 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH17O14917 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH17O14917 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDH17O14917 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PCDH17O14917 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH17O14917 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PCDH17O14917 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH17O14917 U85056.1-201ENST00000616429 682 ntBASIC23.13■■□□□ 1.29
PCDH17O14917 AC091060.1-201ENST00000623524 1766 ntBASIC23.13■■□□□ 1.29
PCDH17O14917 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH17O14917 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH17O14917 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH17O14917 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDH17O14917 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH17O14917 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH17O14917 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH17O14917 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH17O14917 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH17O14917 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
PCDH17O14917 RP9P-202ENST00000450133 1212 ntBASIC23.11■■□□□ 1.29
PCDH17O14917 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH17O14917 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDH17O14917 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH17O14917 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH17O14917 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDH17O14917 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH17O14917 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH17O14917 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH17O14917 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH17O14917 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH17O14917 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH17O14917 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH17O14917 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDH17O14917 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH17O14917 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH17O14917 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH17O14917 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH17O14917 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH17O14917 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
PCDH17O14917 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH17O14917 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH17O14917 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH17O14917 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PCDH17O14917 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDH17O14917 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDH17O14917 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH17O14917 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH17O14917 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PCDH17O14917 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH17O14917 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH17O14917 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH17O14917 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PCDH17O14917 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH17O14917 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH17O14917 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH17O14917 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH17O14917 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDH17O14917 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH17O14917 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH17O14917 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PCDH17O14917 AC133552.2-201ENST00000619106 1032 ntBASIC23.04■■□□□ 1.28
PCDH17O14917 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH17O14917 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH17O14917 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH17O14917 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH17O14917 KRT18P60-201ENST00000312876 1297 ntBASIC23.03■■□□□ 1.28
PCDH17O14917 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.03■■□□□ 1.28
PCDH17O14917 AC026202.3-201ENST00000600805 1127 ntBASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms