Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.43■■■□□ 2.14
CCDC196A0A1B0GTZ2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC196A0A1B0GTZ2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.43■■■□□ 2.14
CCDC196A0A1B0GTZ2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.42■■■□□ 2.14
CCDC196A0A1B0GTZ2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC196A0A1B0GTZ2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 MIR3960-201ENST00000583311 91 ntBASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 RNF126P1-201ENST00000567452 1320 ntBASIC28.41■■■□□ 2.14
CCDC196A0A1B0GTZ2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.4■■■□□ 2.14
CCDC196A0A1B0GTZ2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CCDC196A0A1B0GTZ2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.4■■■□□ 2.14
CCDC196A0A1B0GTZ2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC196A0A1B0GTZ2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC196A0A1B0GTZ2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.39■■■□□ 2.14
CCDC196A0A1B0GTZ2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC196A0A1B0GTZ2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CCDC196A0A1B0GTZ2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
CCDC196A0A1B0GTZ2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.39■■■□□ 2.13
CCDC196A0A1B0GTZ2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC196A0A1B0GTZ2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
CCDC196A0A1B0GTZ2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC196A0A1B0GTZ2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC196A0A1B0GTZ2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
CCDC196A0A1B0GTZ2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC196A0A1B0GTZ2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CCDC196A0A1B0GTZ2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.37■■■□□ 2.13
CCDC196A0A1B0GTZ2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC196A0A1B0GTZ2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC196A0A1B0GTZ2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC196A0A1B0GTZ2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC196A0A1B0GTZ2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC196A0A1B0GTZ2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.36■■■□□ 2.13
CCDC196A0A1B0GTZ2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CCDC196A0A1B0GTZ2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.35■■■□□ 2.13
CCDC196A0A1B0GTZ2 HSD17B1P1-201ENST00000590052 955 ntBASIC28.35■■■□□ 2.13
CCDC196A0A1B0GTZ2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.35■■■□□ 2.13
CCDC196A0A1B0GTZ2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC196A0A1B0GTZ2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC196A0A1B0GTZ2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.34■■■□□ 2.13
CCDC196A0A1B0GTZ2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.34■■■□□ 2.13
CCDC196A0A1B0GTZ2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC196A0A1B0GTZ2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC196A0A1B0GTZ2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.33■■■□□ 2.13
CCDC196A0A1B0GTZ2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC196A0A1B0GTZ2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC196A0A1B0GTZ2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.32■■■□□ 2.12
CCDC196A0A1B0GTZ2 AC092803.2-201ENST00000564287 1899 ntBASIC28.32■■■□□ 2.12
CCDC196A0A1B0GTZ2 AC007029.1-201ENST00000604183 313 ntBASIC28.32■■■□□ 2.12
CCDC196A0A1B0GTZ2 RP9P-202ENST00000450133 1212 ntBASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
CCDC196A0A1B0GTZ2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC196A0A1B0GTZ2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.3■■■□□ 2.12
CCDC196A0A1B0GTZ2 AC091060.1-201ENST00000623524 1766 ntBASIC28.3■■■□□ 2.12
CCDC196A0A1B0GTZ2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC196A0A1B0GTZ2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC196A0A1B0GTZ2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.3■■■□□ 2.12
CCDC196A0A1B0GTZ2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC196A0A1B0GTZ2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.28■■■□□ 2.12
CCDC196A0A1B0GTZ2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC196A0A1B0GTZ2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC196A0A1B0GTZ2 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.27■■■□□ 2.12
CCDC196A0A1B0GTZ2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC196A0A1B0GTZ2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC196A0A1B0GTZ2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.26■■■□□ 2.11
CCDC196A0A1B0GTZ2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCDC196A0A1B0GTZ2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
CCDC196A0A1B0GTZ2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC196A0A1B0GTZ2 AC145676.1-201ENST00000514988 2004 ntBASIC28.25■■■□□ 2.11
CCDC196A0A1B0GTZ2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CCDC196A0A1B0GTZ2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCDC196A0A1B0GTZ2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 RARRES2P2-201ENST00000394842 485 ntBASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 AC093536.1-201ENST00000569153 554 ntBASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCDC196A0A1B0GTZ2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCDC196A0A1B0GTZ2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CCDC196A0A1B0GTZ2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC196A0A1B0GTZ2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC196A0A1B0GTZ2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC196A0A1B0GTZ2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC196A0A1B0GTZ2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms