Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGKV3D-7A0A0C4DH55 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGKV3D-7A0A0C4DH55 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
IGKV3D-7A0A0C4DH55 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGKV3D-7A0A0C4DH55 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC15.25■□□□□ 0.03
IGKV3D-7A0A0C4DH55 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGKV3D-7A0A0C4DH55 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.24■□□□□ 0.03
IGKV3D-7A0A0C4DH55 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
IGKV3D-7A0A0C4DH55 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IGKV3D-7A0A0C4DH55 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGKV3D-7A0A0C4DH55 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
IGKV3D-7A0A0C4DH55 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 PREB-202ENST00000406567 1910 ntTSL 5 BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.22■□□□□ 0.03
IGKV3D-7A0A0C4DH55 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGKV3D-7A0A0C4DH55 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IGKV3D-7A0A0C4DH55 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IGKV3D-7A0A0C4DH55 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
IGKV3D-7A0A0C4DH55 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
IGKV3D-7A0A0C4DH55 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
IGKV3D-7A0A0C4DH55 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGKV3D-7A0A0C4DH55 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGKV3D-7A0A0C4DH55 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 MVK-208ENST00000539696 608 ntTSL 5 BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 AL024507.2-201ENST00000606070 2574 ntBASIC15.19■□□□□ 0.02
IGKV3D-7A0A0C4DH55 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 AC092803.2-201ENST00000564287 1899 ntBASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGKV3D-7A0A0C4DH55 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-7A0A0C4DH55 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 MED17-227ENST00000640521 2047 ntTSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-7A0A0C4DH55 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.15■□□□□ 0.02
IGKV3D-7A0A0C4DH55 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms