Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV20-1A0A075B6N2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 AL024507.2-201ENST00000606070 2574 ntBASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 MVK-208ENST00000539696 608 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV20-1A0A075B6N2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV20-1A0A075B6N2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV20-1A0A075B6N2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV20-1A0A075B6N2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRBV20-1A0A075B6N2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV20-1A0A075B6N2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV20-1A0A075B6N2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV20-1A0A075B6N2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV20-1A0A075B6N2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV20-1A0A075B6N2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV20-1A0A075B6N2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV20-1A0A075B6N2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV20-1A0A075B6N2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV20-1A0A075B6N2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV20-1A0A075B6N2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV20-1A0A075B6N2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV20-1A0A075B6N2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 WHAMMP3-201ENST00000611636 1609 ntBASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV20-1A0A075B6N2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 DUSP8P5-201ENST00000422884 1815 ntBASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV20-1A0A075B6N2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV20-1A0A075B6N2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 AC097639.1-201ENST00000565519 1891 ntBASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRBV20-1A0A075B6N2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms