Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB11Q9Y5F2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 MIR1233-2-201ENST00000408138 82 ntBASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 MIR1233-1-201ENST00000408722 82 ntBASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 DDX43P3-201ENST00000441064 443 ntBASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 AC006116.8-202ENST00000587620 1550 ntBASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB11Q9Y5F2 TP73-AS1-210ENST00000637775 1455 ntBASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 PMS2P7-201ENST00000506558 1336 ntBASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB11Q9Y5F2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 AC009949.1-201ENST00000623048 1830 ntBASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 AC012317.2-201ENST00000623305 2251 ntBASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 RNA5SP419-201ENST00000515908 135 ntBASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 SLC25A1P1-201ENST00000528351 927 ntBASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 AC106730.1-201ENST00000566722 1090 ntBASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB11Q9Y5F2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms