Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC063926.2-201ENST00000623766 1308 ntBASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 KRT18P32-201ENST00000424695 1287 ntBASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 RN7SL589P-201ENST00000481268 310 ntBASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 AL645728.2-201ENST00000641974 660 ntBASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.93■■□□□ 1.1
RTCBQ9Y3I0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AL135999.2-201ENST00000622438 1686 ntBASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 TUBB3P1-201ENST00000405796 1332 ntBASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 MIR943-201ENST00000401286 94 ntBASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AC236430.1-201ENST00000402231 743 ntBASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 TFAMP1-201ENST00000412727 736 ntBASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 AC087641.1-201ENST00000557561 1021 ntBASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.92■■□□□ 1.1
RTCBQ9Y3I0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 FAM58DP-201ENST00000428076 619 ntBASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 TERF1P3-201ENST00000505638 1227 ntBASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 AC243562.1-201ENST00000560672 389 ntBASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 AP001059.3-201ENST00000619053 235 ntBASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 AL020996.1-203ENST00000536896 2307 ntBASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RTCBQ9Y3I0 AC135776.1-201ENST00000319817 2481 ntBASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCBQ9Y3I0 AC002472.2-201ENST00000442739 958 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms