Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 FAM8A3P-201ENST00000427218 844 ntBASIC23.84■■□□□ 1.41
NINLQ9Y2I6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 OR7E47P-204ENST00000575924 449 ntBASIC23.84■■□□□ 1.41
NINLQ9Y2I6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 AC004790.2-201ENST00000623588 572 ntBASIC23.83■■□□□ 1.41
NINLQ9Y2I6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 AC134684.3-201ENST00000641758 218 ntBASIC23.83■■□□□ 1.41
NINLQ9Y2I6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC23.83■■□□□ 1.41
NINLQ9Y2I6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.4
NINLQ9Y2I6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NINLQ9Y2I6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NINLQ9Y2I6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.83■■□□□ 1.4
NINLQ9Y2I6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 PAWRP1-201ENST00000451083 565 ntBASIC23.82■■□□□ 1.4
NINLQ9Y2I6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 MIR3687-2-201ENST00000577708 61 ntBASIC23.82■■□□□ 1.4
NINLQ9Y2I6 AC092364.2-202ENST00000597012 1073 ntBASIC23.82■■□□□ 1.4
NINLQ9Y2I6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 MIR3687-1-201ENST00000614492 61 ntBASIC23.82■■□□□ 1.4
NINLQ9Y2I6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.82■■□□□ 1.4
NINLQ9Y2I6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 KRT18P2-201ENST00000447938 1258 ntBASIC23.81■■□□□ 1.4
NINLQ9Y2I6 HLA-J-202ENST00000469281 1241 ntBASIC23.81■■□□□ 1.4
NINLQ9Y2I6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 RFPL4AP1-201ENST00000530883 850 ntBASIC23.81■■□□□ 1.4
NINLQ9Y2I6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 LYSMD4-203ENST00000378904 2122 ntBASIC23.81■■□□□ 1.4
NINLQ9Y2I6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.81■■□□□ 1.4
NINLQ9Y2I6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 MCCD1P2-201ENST00000423228 335 ntBASIC23.8■■□□□ 1.4
NINLQ9Y2I6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 AC010507.1-201ENST00000633895 436 ntBASIC23.8■■□□□ 1.4
NINLQ9Y2I6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
NINLQ9Y2I6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms