Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 CRYGEP-201ENST00000412192 528 ntBASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 UPF3AP3-201ENST00000420996 769 ntBASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC005104.2-201ENST00000427818 678 ntBASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC002347.1-201ENST00000569543 541 ntBASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC064836.3-201ENST00000607928 673 ntBASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AC006504.4-201ENST00000592118 1568 ntBASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AP000997.3-201ENST00000623333 2250 ntBASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 AL139424.1-201ENST00000607572 797 ntBASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
NCKAP1Q9Y2A7 FLJ13224-201ENST00000313737 1514 ntBASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 YBX2P1-201ENST00000394192 760 ntBASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 ELK2BP-201ENST00000415014 1224 ntBASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1Q9Y2A7 AC009336.1-201ENST00000608941 1553 ntBASIC17.52■□□□□ 0.39
NCKAP1Q9Y2A7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NCKAP1Q9Y2A7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.52■□□□□ 0.39
NCKAP1Q9Y2A7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKAP1Q9Y2A7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCKAP1Q9Y2A7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKAP1Q9Y2A7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms