Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 AC073621.1-201ENST00000392730 636 ntBASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 AL356488.2-201ENST00000602755 427 ntBASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 AL139424.1-201ENST00000607572 797 ntBASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 PGM5P2-202ENST00000637225 1043 ntBASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN1Q9UMX0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
UBQLN1Q9UMX0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.77■□□□□ 0.59
UBQLN1Q9UMX0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
UBQLN1Q9UMX0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN1Q9UMX0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN1Q9UMX0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 RPL13AP23-201ENST00000480739 586 ntBASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 AC136632.2-201ENST00000512891 861 ntBASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 AF228730.7-201ENST00000641842 219 ntBASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN1Q9UMX0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 LINC00982-205ENST00000420957 435 ntBASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 AC117500.6-201ENST00000624871 588 ntBASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN1Q9UMX0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms