Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 AC109462.3-201ENST00000573934 613 ntBASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CUEDC1Q9NWM3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 KRT18P31-201ENST00000506277 1292 ntBASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 AL591684.3-201ENST00000605187 298 ntBASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 LINC01451-201ENST00000623792 534 ntBASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CUEDC1Q9NWM3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 AL049757.1-201ENST00000616842 1596 ntBASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 KRT16P4-201ENST00000453883 522 ntBASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.94■□□□□ 0.3
CUEDC1Q9NWM3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms