Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 AC034232.1-201ENST00000506026 1064 ntBASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 LINC01451-201ENST00000623792 534 ntBASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHB16Q9NRJ7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 PCDHA1-201ENST00000378133 2726 ntBASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 AC073912.3-201ENST00000624414 853 ntBASIC15.27■□□□□ 0.04
PCDHB16Q9NRJ7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms