Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AC012317.2-201ENST00000623305 2251 ntBASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 CLEC4GP1-201ENST00000596555 870 ntBASIC15.35■□□□□ 0.05
CDH20Q9HBT6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 LINC01711-201ENST00000598340 967 ntBASIC15.35■□□□□ 0.05
CDH20Q9HBT6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AC114341.1-201ENST00000618070 349 ntBASIC15.35■□□□□ 0.05
CDH20Q9HBT6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AC010460.3-201ENST00000511359 1579 ntBASIC15.35■□□□□ 0.05
CDH20Q9HBT6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 GNAS-203ENST00000306120 1878 ntBASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 COX5BP2-201ENST00000392354 334 ntBASIC15.34■□□□□ 0.05
CDH20Q9HBT6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 AC011467.2-201ENST00000598425 242 ntBASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH20Q9HBT6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH20Q9HBT6 AC006116.8-202ENST00000587620 1550 ntBASIC15.33■□□□□ 0.05
CDH20Q9HBT6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH20Q9HBT6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms