Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 KRT8P47-201ENST00000604727 1398 ntBASIC21.52■■□□□ 1.04
UPF2Q9HAU5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
UPF2Q9HAU5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
UPF2Q9HAU5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
UPF2Q9HAU5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
UPF2Q9HAU5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UPF2Q9HAU5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 AC009947.2-201ENST00000444014 672 ntBASIC21.5■■□□□ 1.03
UPF2Q9HAU5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 FITM1-202ENST00000559294 800 ntBASIC21.5■■□□□ 1.03
UPF2Q9HAU5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 AL512604.3-201ENST00000569583 964 ntBASIC21.5■■□□□ 1.03
UPF2Q9HAU5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.5■■□□□ 1.03
UPF2Q9HAU5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms