Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 UPK3BP1-201ENST00000428678 509 ntBASIC18.7■□□□□ 0.58
SYNCQ9H7C4 AC125634.1-201ENST00000438758 1403 ntBASIC18.7■□□□□ 0.58
SYNCQ9H7C4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 TPSP2-201ENST00000561760 610 ntBASIC18.7■□□□□ 0.58
SYNCQ9H7C4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 LINC01451-201ENST00000623792 534 ntBASIC18.7■□□□□ 0.58
SYNCQ9H7C4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNCQ9H7C4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 LINC00304-203ENST00000565008 1864 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 AC010460.3-201ENST00000511359 1579 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 AP000867.3-201ENST00000524675 377 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 AC005336.2-201ENST00000593183 939 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 AC092119.3-201ENST00000612618 583 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 HLA-J-201ENST00000462773 1622 ntBASIC18.69■□□□□ 0.58
SYNCQ9H7C4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNCQ9H7C4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AC139713.2-201ENST00000641328 2723 ntBASIC18.68■□□□□ 0.58
SYNCQ9H7C4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 PRORSD1P-202ENST00000563365 2154 ntBASIC18.68■□□□□ 0.58
SYNCQ9H7C4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AC007967.3-201ENST00000434308 558 ntBASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AC091607.1-201ENST00000490318 1060 ntBASIC18.68■□□□□ 0.58
SYNCQ9H7C4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AC092329.2-201ENST00000598402 547 ntBASIC18.68■□□□□ 0.58
SYNCQ9H7C4 AL138831.2-201ENST00000606564 490 ntBASIC18.68■□□□□ 0.58
SYNCQ9H7C4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SYNCQ9H7C4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNCQ9H7C4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms