Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.65■□□□□ 0.42
VPS11Q9H270 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VPS11Q9H270 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VPS11Q9H270 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VPS11Q9H270 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
VPS11Q9H270 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VPS11Q9H270 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS11Q9H270 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS11Q9H270 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS11Q9H270 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS11Q9H270 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VPS11Q9H270 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
VPS11Q9H270 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VPS11Q9H270 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.64■□□□□ 0.42
VPS11Q9H270 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VPS11Q9H270 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VPS11Q9H270 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VPS11Q9H270 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VPS11Q9H270 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS11Q9H270 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS11Q9H270 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS11Q9H270 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS11Q9H270 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VPS11Q9H270 AL023973.1-201ENST00000624619 620 ntBASIC17.64■□□□□ 0.41
VPS11Q9H270 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 KRT18P22-201ENST00000402024 1347 ntBASIC17.64■□□□□ 0.41
VPS11Q9H270 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VPS11Q9H270 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS11Q9H270 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
VPS11Q9H270 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VPS11Q9H270 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VPS11Q9H270 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS11Q9H270 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VPS11Q9H270 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
VPS11Q9H270 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 AC060834.1-201ENST00000443027 2032 ntBASIC17.63■□□□□ 0.41
VPS11Q9H270 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS11Q9H270 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS11Q9H270 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS11Q9H270 KRT89P-201ENST00000620027 1478 ntBASIC17.63■□□□□ 0.41
VPS11Q9H270 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS11Q9H270 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms