Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 AC051619.7-201ENST00000568314 623 ntBASIC22.24■■□□□ 1.15
SMARCC1Q92922 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 AL135999.2-201ENST00000622438 1686 ntBASIC22.23■■□□□ 1.15
SMARCC1Q92922 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 AC055876.3-201ENST00000431496 288 ntBASIC22.23■■□□□ 1.15
SMARCC1Q92922 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 AC138649.4-201ENST00000612222 287 ntBASIC22.23■■□□□ 1.15
SMARCC1Q92922 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.23■■□□□ 1.15
SMARCC1Q92922 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMARCC1Q92922 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 BASP1P1-201ENST00000430708 665 ntBASIC22.22■■□□□ 1.15
SMARCC1Q92922 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 AC079140.1-201ENST00000508039 487 ntBASIC22.22■■□□□ 1.15
SMARCC1Q92922 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 AP001059.3-201ENST00000619053 235 ntBASIC22.22■■□□□ 1.15
SMARCC1Q92922 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 AF228730.6-201ENST00000641497 218 ntBASIC22.22■■□□□ 1.15
SMARCC1Q92922 AC084121.3-201ENST00000641716 218 ntBASIC22.22■■□□□ 1.15
SMARCC1Q92922 AC105233.6-201ENST00000642093 218 ntBASIC22.22■■□□□ 1.15
SMARCC1Q92922 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC1Q92922 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SMARCC1Q92922 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 TFAMP1-201ENST00000412727 736 ntBASIC22.21■■□□□ 1.15
SMARCC1Q92922 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 AC046185.3-201ENST00000623228 1824 ntBASIC22.21■■□□□ 1.15
SMARCC1Q92922 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC1Q92922 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.21■■□□□ 1.15
SMARCC1Q92922 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms