Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 HOMER2P1-201ENST00000455653 964 ntBASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 AL390719.2-201ENST00000606993 987 ntBASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLHC1Q8NHS4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CLHC1Q8NHS4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLHC1Q8NHS4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.83■□□□□ 0.29
CLHC1Q8NHS4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLHC1Q8NHS4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 SPDYE13P-201ENST00000445314 798 ntBASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLHC1Q8NHS4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
CLHC1Q8NHS4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLHC1Q8NHS4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.82■□□□□ 0.28
CLHC1Q8NHS4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms