Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 PHGDH-209ENST00000641074 1780 ntBASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF548Q8NEK5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 FLJ13224-201ENST00000313737 1514 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 MIR940-201ENST00000401276 94 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 AC096633.1-201ENST00000422446 749 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 IGHV3-22-201ENST00000520721 359 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 AC012640.2-201ENST00000561606 901 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 MTDHP4-201ENST00000600287 670 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 TERC-201ENST00000602385 541 ntBASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF548Q8NEK5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 AC092910.1-201ENST00000482027 1129 ntBASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 AC008735.5-201ENST00000623544 497 ntBASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 PMS2P7-201ENST00000506558 1336 ntBASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZNF548Q8NEK5 KRT8P47-201ENST00000604727 1398 ntBASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 AC010460.3-201ENST00000511359 1579 ntBASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 AC104109.2-201ENST00000602919 1418 ntBASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 AC139713.2-201ENST00000641328 2723 ntBASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 AC098831.1-202ENST00000438821 336 ntBASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF548Q8NEK5 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms