Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 AC064836.3-201ENST00000607928 673 ntBASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A9Q8NBW4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 AC023274.1-201ENST00000418278 595 ntBASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 RPS15P9-201ENST00000494093 319 ntBASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 AC055717.3-201ENST00000622967 595 ntBASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A9Q8NBW4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 AC108073.2-201ENST00000464002 357 ntBASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 IGHV3-65-201ENST00000523210 341 ntBASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 AC040169.1-201ENST00000565382 521 ntBASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 AC010327.4-202ENST00000591484 748 ntBASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 AC008667.4-201ENST00000607370 168 ntBASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A9Q8NBW4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 AC135050.7-201ENST00000624508 2218 ntBASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 AL354751.1-201ENST00000412768 1863 ntBASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A9Q8NBW4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms