Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.86■□□□□ 0.61
COLGALT1Q8NBJ5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 AC003669.1-201ENST00000334569 611 ntBASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 HCG4B-203ENST00000450128 991 ntBASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 RPS15P9-201ENST00000494093 319 ntBASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 IGHV3-65-201ENST00000523210 341 ntBASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 AC018845.2-201ENST00000568326 409 ntBASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 AC008667.4-201ENST00000607370 168 ntBASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COLGALT1Q8NBJ5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 AC093677.2-201ENST00000600169 1863 ntBASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 AC019129.2-201ENST00000609837 1235 ntBASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLGALT1Q8NBJ5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 KRT18P28-201ENST00000453838 1332 ntBASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COLGALT1Q8NBJ5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COLGALT1Q8NBJ5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COLGALT1Q8NBJ5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COLGALT1Q8NBJ5 PRSS29P-201ENST00000440800 595 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms