Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 AC241585.1-201ENST00000433527 519 ntBASIC24.61■■□□□ 1.53
UBR1Q8IWV7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 AC010336.2-201ENST00000564226 506 ntBASIC24.61■■□□□ 1.53
UBR1Q8IWV7 AP000842.3-202ENST00000569238 1080 ntBASIC24.61■■□□□ 1.53
UBR1Q8IWV7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 MIR6752-201ENST00000618442 71 ntBASIC24.61■■□□□ 1.53
UBR1Q8IWV7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.61■■□□□ 1.53
UBR1Q8IWV7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 AC109635.5-201ENST00000533593 962 ntBASIC24.6■■□□□ 1.53
UBR1Q8IWV7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
UBR1Q8IWV7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 AL008721.1-201ENST00000609964 604 ntBASIC24.59■■□□□ 1.53
UBR1Q8IWV7 AC009118.2-201ENST00000613275 655 ntBASIC24.59■■□□□ 1.53
UBR1Q8IWV7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBR1Q8IWV7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 MIR3909-201ENST00000579518 119 ntBASIC24.58■■□□□ 1.53
UBR1Q8IWV7 AC005412.3-201ENST00000580309 715 ntBASIC24.58■■□□□ 1.53
UBR1Q8IWV7 AL662799.1-202ENST00000614205 422 ntBASIC24.58■■□□□ 1.53
UBR1Q8IWV7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBR1Q8IWV7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 SPDYE12P-201ENST00000618416 771 ntBASIC24.58■■□□□ 1.52
UBR1Q8IWV7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
UBR1Q8IWV7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBR1Q8IWV7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms