Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 AC022211.2-201ENST00000585075 2527 ntBASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 PCDHA12-202ENST00000613593 2588 ntBASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF549Q6P9A3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AC122714.2-201ENST00000502787 707 ntBASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 KRT18P35-201ENST00000510488 1269 ntBASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AC109462.3-201ENST00000573934 613 ntBASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AL049757.1-201ENST00000616842 1596 ntBASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF549Q6P9A3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 TPSP2-201ENST00000561760 610 ntBASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZNF549Q6P9A3 KRT18P1-202ENST00000452408 1331 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms