Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 BX276092.5-203ENST00000456199 560 ntBASIC15.98■□□□□ 0.15
NIPAL3Q6P499 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AC009154.2-201ENST00000621177 724 ntBASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AC116407.4-201ENST00000623319 1061 ntBASIC15.98■□□□□ 0.15
NIPAL3Q6P499 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 AL358472.4-201ENST00000633140 710 ntBASIC15.98■□□□□ 0.15
NIPAL3Q6P499 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.98■□□□□ 0.15
NIPAL3Q6P499 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 GUSBP12-201ENST00000513727 720 ntBASIC15.97■□□□□ 0.15
NIPAL3Q6P499 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 KRT8P26-201ENST00000534154 1276 ntBASIC15.97■□□□□ 0.15
NIPAL3Q6P499 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 AP000550.4-202ENST00000639755 178 ntBASIC15.97■□□□□ 0.15
NIPAL3Q6P499 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NIPAL3Q6P499 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms