Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.27□□□□□ -0.28
MRPL54Q6P161 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 AC092068.3-201ENST00000587894 2016 ntBASIC13.27□□□□□ -0.28
MRPL54Q6P161 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
MRPL54Q6P161 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.27□□□□□ -0.28
MRPL54Q6P161 DBET-201ENST00000630918 3363 ntBASIC13.27□□□□□ -0.28
MRPL54Q6P161 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.27□□□□□ -0.29
MRPL54Q6P161 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 AL163051.1-201ENST00000569214 1512 ntBASIC13.27□□□□□ -0.29
MRPL54Q6P161 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 AL513523.2-202ENST00000427283 2040 ntBASIC13.27□□□□□ -0.29
MRPL54Q6P161 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
MRPL54Q6P161 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MRPL54Q6P161 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AL136379.1-201ENST00000623471 2642 ntBASIC13.26□□□□□ -0.29
MRPL54Q6P161 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AC034268.1-201ENST00000441047 882 ntBASIC13.26□□□□□ -0.29
MRPL54Q6P161 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 CYP2T1P-202ENST00000641596 2535 ntBASIC13.26□□□□□ -0.29
MRPL54Q6P161 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MRPL54Q6P161 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
MRPL54Q6P161 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MRPL54Q6P161 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.25□□□□□ -0.29
MRPL54Q6P161 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms