Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 MIR564-202ENST00000385049 94 ntBASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 DRAXINP1-201ENST00000437611 948 ntBASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 AP002469.2-201ENST00000531724 424 ntBASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 AC120114.3-201ENST00000611923 658 ntBASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 AC034236.2-201ENST00000606662 1610 ntBASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 AC106820.2-201ENST00000563775 3264 ntBASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 SLC25A6P4-201ENST00000586535 553 ntBASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 AL356309.3-201ENST00000624132 1934 ntBASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CHRFAM7AQ494W8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 KRT18P13-201ENST00000400056 1290 ntBASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 AC104819.1-201ENST00000504587 486 ntBASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 TPSP2-201ENST00000561760 610 ntBASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 AL121912.1-201ENST00000603683 238 ntBASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 AC139530.3-201ENST00000620344 690 ntBASIC15.36■□□□□ 0.05
CHRFAM7AQ494W8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms