Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 AL138831.2-201ENST00000606564 490 ntBASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD3Q3KNS1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.14■□□□□ 0.34
PTCHD3Q3KNS1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PTCHD3Q3KNS1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PTCHD3Q3KNS1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 FAAHP1-202ENST00000446499 1238 ntBASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 AC020916.1-201ENST00000587762 1774 ntBASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD3Q3KNS1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD3Q3KNS1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 AC108860.2-201ENST00000562760 2183 ntBASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD3Q3KNS1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms