Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AL022326.1-202ENST00000641533 845 ntBASIC13.7□□□□□ -0.22
CFHR3Q02985 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CFHR3Q02985 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.7□□□□□ -0.22
CFHR3Q02985 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CFHR3Q02985 AC009336.1-201ENST00000608941 1553 ntBASIC13.7□□□□□ -0.22
CFHR3Q02985 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.7□□□□□ -0.22
CFHR3Q02985 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CFHR3Q02985 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CFHR3Q02985 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CFHR3Q02985 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.69□□□□□ -0.22
CFHR3Q02985 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 AC148477.5-201ENST00000625164 1645 ntBASIC13.69□□□□□ -0.22
CFHR3Q02985 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CFHR3Q02985 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CFHR3Q02985 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.69□□□□□ -0.22
CFHR3Q02985 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
CFHR3Q02985 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 RNPS1P1-201ENST00000507437 918 ntBASIC13.69□□□□□ -0.22
CFHR3Q02985 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.69□□□□□ -0.22
CFHR3Q02985 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.69□□□□□ -0.22
CFHR3Q02985 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.69□□□□□ -0.22
CFHR3Q02985 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.69□□□□□ -0.22
CFHR3Q02985 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.69□□□□□ -0.22
CFHR3Q02985 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CFHR3Q02985 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CFHR3Q02985 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CFHR3Q02985 AC133963.1-201ENST00000504166 1679 ntBASIC13.69□□□□□ -0.22
CFHR3Q02985 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CFHR3Q02985 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CFHR3Q02985 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.68□□□□□ -0.22
CFHR3Q02985 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CFHR3Q02985 BX005266.1-201ENST00000473402 457 ntBASIC13.68□□□□□ -0.22
CFHR3Q02985 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.68□□□□□ -0.22
CFHR3Q02985 STK19B-204ENST00000512515 211 ntBASIC13.68□□□□□ -0.22
CFHR3Q02985 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.68□□□□□ -0.22
CFHR3Q02985 AL773604.1-201ENST00000617417 272 ntBASIC13.68□□□□□ -0.22
CFHR3Q02985 AC148477.8-201ENST00000624298 468 ntBASIC13.68□□□□□ -0.22
CFHR3Q02985 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.68□□□□□ -0.22
CFHR3Q02985 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.68□□□□□ -0.22
CFHR3Q02985 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CFHR3Q02985 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CFHR3Q02985 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.68□□□□□ -0.22
CFHR3Q02985 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms