Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.72■□□□□ 0.27
PHC1P78364 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.72■□□□□ 0.27
PHC1P78364 AC106886.4-201ENST00000623557 2502 ntBASIC16.72■□□□□ 0.27
PHC1P78364 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PHC1P78364 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 AC060834.1-201ENST00000443027 2032 ntBASIC16.72■□□□□ 0.27
PHC1P78364 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PHC1P78364 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PHC1P78364 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHC1P78364 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 AC016396.2-201ENST00000562575 1417 ntBASIC16.71■□□□□ 0.27
PHC1P78364 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PHC1P78364 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.71■□□□□ 0.27
PHC1P78364 FAM8A6P-201ENST00000407496 1135 ntBASIC16.71■□□□□ 0.27
PHC1P78364 AC096633.1-201ENST00000422446 749 ntBASIC16.71■□□□□ 0.27
PHC1P78364 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.71■□□□□ 0.27
PHC1P78364 ZNF444P1-201ENST00000559497 298 ntBASIC16.71■□□□□ 0.27
PHC1P78364 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 RNF126P1-202ENST00000569893 925 ntBASIC16.71■□□□□ 0.27
PHC1P78364 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 GPR32P1-201ENST00000601788 811 ntBASIC16.71■□□□□ 0.27
PHC1P78364 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PHC1P78364 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 AC116353.5-201ENST00000638148 1699 ntBASIC16.71■□□□□ 0.27
PHC1P78364 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHC1P78364 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
PHC1P78364 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHC1P78364 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHC1P78364 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHC1P78364 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHC1P78364 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHC1P78364 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.7■□□□□ 0.26
PHC1P78364 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
PHC1P78364 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
PHC1P78364 LINC01311-201ENST00000565162 1445 ntBASIC16.7■□□□□ 0.26
PHC1P78364 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PHC1P78364 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.7■□□□□ 0.26
PHC1P78364 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.7■□□□□ 0.26
PHC1P78364 AC005521.1-201ENST00000393351 872 ntBASIC16.7■□□□□ 0.26
PHC1P78364 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.7■□□□□ 0.26
PHC1P78364 VENTXP5-201ENST00000523979 775 ntBASIC16.7■□□□□ 0.26
PHC1P78364 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
PHC1P78364 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.7■□□□□ 0.26
PHC1P78364 AC005332.3-201ENST00000589904 676 ntBASIC16.7■□□□□ 0.26
PHC1P78364 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.7■□□□□ 0.26
PHC1P78364 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.7■□□□□ 0.26
PHC1P78364 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 AGGF1P2-201ENST00000426656 2106 ntBASIC16.7■□□□□ 0.26
PHC1P78364 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.7■□□□□ 0.26
PHC1P78364 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHC1P78364 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms