Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.09■□□□□ 0.33
YBX1P67809 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.09■□□□□ 0.33
YBX1P67809 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.09■□□□□ 0.33
YBX1P67809 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 AC097374.2-201ENST00000618617 1306 ntBASIC17.09■□□□□ 0.33
YBX1P67809 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.09■□□□□ 0.33
YBX1P67809 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.09■□□□□ 0.33
YBX1P67809 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.09■□□□□ 0.33
YBX1P67809 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YBX1P67809 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YBX1P67809 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YBX1P67809 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
YBX1P67809 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.08■□□□□ 0.33
YBX1P67809 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
YBX1P67809 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.08■□□□□ 0.32
YBX1P67809 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.08■□□□□ 0.32
YBX1P67809 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.08■□□□□ 0.32
YBX1P67809 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.08■□□□□ 0.32
YBX1P67809 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.08■□□□□ 0.32
YBX1P67809 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.08■□□□□ 0.32
YBX1P67809 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.08■□□□□ 0.32
YBX1P67809 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YBX1P67809 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
YBX1P67809 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.08■□□□□ 0.32
YBX1P67809 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
YBX1P67809 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
YBX1P67809 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
YBX1P67809 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
YBX1P67809 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
YBX1P67809 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
YBX1P67809 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.07■□□□□ 0.32
YBX1P67809 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.07■□□□□ 0.32
YBX1P67809 NUS1P1-201ENST00000446295 882 ntBASIC17.07■□□□□ 0.32
YBX1P67809 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.07■□□□□ 0.32
YBX1P67809 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.07■□□□□ 0.32
YBX1P67809 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 PRELID1P1-202ENST00000567272 903 ntBASIC17.07■□□□□ 0.32
YBX1P67809 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.07■□□□□ 0.32
YBX1P67809 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
YBX1P67809 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
YBX1P67809 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
YBX1P67809 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
YBX1P67809 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.06■□□□□ 0.32
YBX1P67809 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.06■□□□□ 0.32
YBX1P67809 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 TSPY19P-201ENST00000418461 509 ntBASIC17.06■□□□□ 0.32
YBX1P67809 TSPY18P-201ENST00000441642 509 ntBASIC17.06■□□□□ 0.32
YBX1P67809 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.06■□□□□ 0.32
YBX1P67809 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms