Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.83■□□□□ 0.12
RPS4XP62701 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.83■□□□□ 0.12
RPS4XP62701 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RPS4XP62701 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RPS4XP62701 AD000864.1-201ENST00000624076 2295 ntBASIC15.83■□□□□ 0.12
RPS4XP62701 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4XP62701 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.83■□□□□ 0.12
RPS4XP62701 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4XP62701 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 AL845331.1-201ENST00000424978 1190 ntBASIC15.82■□□□□ 0.12
RPS4XP62701 AC007967.3-201ENST00000434308 558 ntBASIC15.82■□□□□ 0.12
RPS4XP62701 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4XP62701 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.82■□□□□ 0.12
RPS4XP62701 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.82■□□□□ 0.12
RPS4XP62701 GUSBP12-201ENST00000513727 720 ntBASIC15.82■□□□□ 0.12
RPS4XP62701 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.82■□□□□ 0.12
RPS4XP62701 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4XP62701 AC019129.2-201ENST00000609837 1235 ntBASIC15.82■□□□□ 0.12
RPS4XP62701 AL592071.1-201ENST00000611956 408 ntBASIC15.82■□□□□ 0.12
RPS4XP62701 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.82■□□□□ 0.12
RPS4XP62701 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4XP62701 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS4XP62701 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPS4XP62701 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4XP62701 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS4XP62701 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RPS4XP62701 AC125634.1-201ENST00000438758 1403 ntBASIC15.81■□□□□ 0.12
RPS4XP62701 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 AP000867.3-201ENST00000524675 377 ntBASIC15.81■□□□□ 0.12
RPS4XP62701 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS4XP62701 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.81■□□□□ 0.12
RPS4XP62701 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.81■□□□□ 0.12
RPS4XP62701 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.81■□□□□ 0.12
RPS4XP62701 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 AL121772.3-201ENST00000610840 674 ntBASIC15.81■□□□□ 0.12
RPS4XP62701 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS4XP62701 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.81■□□□□ 0.12
RPS4XP62701 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS4XP62701 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
RPS4XP62701 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPS4XP62701 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPS4XP62701 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms