Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 TSPY14P-201ENST00000303979 915 ntBASIC14.31□□□□□ -0.12
SPCS3P61009 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 AC098590.1-201ENST00000468126 897 ntBASIC14.31□□□□□ -0.12
SPCS3P61009 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 MIR4785-201ENST00000585005 73 ntBASIC14.31□□□□□ -0.12
SPCS3P61009 AP000525.1-201ENST00000608286 694 ntBASIC14.31□□□□□ -0.12
SPCS3P61009 NKILA-202ENST00000614771 2598 ntBASIC14.31□□□□□ -0.12
SPCS3P61009 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 AC009949.1-201ENST00000623048 1830 ntBASIC14.31□□□□□ -0.12
SPCS3P61009 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
SPCS3P61009 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPCS3P61009 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPCS3P61009 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SPCS3P61009 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 PVRIG2P-201ENST00000435460 978 ntBASIC14.3□□□□□ -0.12
SPCS3P61009 AC128688.1-201ENST00000487626 519 ntBASIC14.3□□□□□ -0.12
SPCS3P61009 AC113404.2-201ENST00000507884 177 ntBASIC14.3□□□□□ -0.12
SPCS3P61009 EGLN1P1-201ENST00000531623 762 ntBASIC14.3□□□□□ -0.12
SPCS3P61009 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 MIR3917-201ENST00000580971 93 ntBASIC14.3□□□□□ -0.12
SPCS3P61009 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.3□□□□□ -0.12
SPCS3P61009 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.3□□□□□ -0.12
SPCS3P61009 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPCS3P61009 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.3□□□□□ -0.12
SPCS3P61009 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 MIR1238-201ENST00000408483 83 ntBASIC14.29□□□□□ -0.12
SPCS3P61009 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPCS3P61009 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.29□□□□□ -0.12
SPCS3P61009 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.29□□□□□ -0.12
SPCS3P61009 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms