Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.07□□□□□ -0.32
CMC4P56277 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 PMPCAP1-201ENST00000508114 1576 ntBASIC13.07□□□□□ -0.32
CMC4P56277 AL049757.1-201ENST00000616842 1596 ntBASIC13.07□□□□□ -0.32
CMC4P56277 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMC4P56277 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CMC4P56277 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 AC008764.6-201ENST00000595909 2069 ntBASIC13.06□□□□□ -0.32
CMC4P56277 AC016396.2-201ENST00000562575 1417 ntBASIC13.06□□□□□ -0.32
CMC4P56277 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.06□□□□□ -0.32
CMC4P56277 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.06□□□□□ -0.32
CMC4P56277 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.06□□□□□ -0.32
CMC4P56277 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.06□□□□□ -0.32
CMC4P56277 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.06□□□□□ -0.32
CMC4P56277 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.06□□□□□ -0.32
CMC4P56277 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 STK25P1-201ENST00000585406 838 ntBASIC13.06□□□□□ -0.32
CMC4P56277 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CMC4P56277 MTDHP3-201ENST00000594186 672 ntBASIC13.06□□□□□ -0.32
CMC4P56277 AL139327.4-201ENST00000612362 153 ntBASIC13.06□□□□□ -0.32
CMC4P56277 AL355877.3-201ENST00000622820 899 ntBASIC13.06□□□□□ -0.32
CMC4P56277 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.06□□□□□ -0.32
CMC4P56277 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.06□□□□□ -0.32
CMC4P56277 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CMC4P56277 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CMC4P56277 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.06□□□□□ -0.32
CMC4P56277 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
CMC4P56277 KRT8P10-201ENST00000450021 1447 ntBASIC13.05□□□□□ -0.32
CMC4P56277 SIGLEC16-201ENST00000599858 1437 ntBASIC13.05□□□□□ -0.32
CMC4P56277 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CMC4P56277 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.05□□□□□ -0.32
CMC4P56277 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.05□□□□□ -0.32
CMC4P56277 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.05□□□□□ -0.32
CMC4P56277 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.05□□□□□ -0.32
CMC4P56277 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.05□□□□□ -0.32
CMC4P56277 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.05□□□□□ -0.32
CMC4P56277 AC008608.2-201ENST00000606089 416 ntBASIC13.05□□□□□ -0.32
CMC4P56277 AC019129.2-201ENST00000609837 1235 ntBASIC13.05□□□□□ -0.32
CMC4P56277 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CMC4P56277 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.05□□□□□ -0.32
CMC4P56277 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms