Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.5■□□□□ 0.55
RFC1P35251 LYSMD4-203ENST00000378904 2122 ntBASIC18.5■□□□□ 0.55
RFC1P35251 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RFC1P35251 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFC1P35251 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFC1P35251 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFC1P35251 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
RFC1P35251 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RFC1P35251 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC1P35251 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RFC1P35251 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC1P35251 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC1P35251 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RFC1P35251 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
RFC1P35251 VENTXP7-201ENST00000475503 772 ntBASIC18.49■□□□□ 0.55
RFC1P35251 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RFC1P35251 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC1P35251 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 AC069148.1-201ENST00000608741 768 ntBASIC18.49■□□□□ 0.55
RFC1P35251 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RFC1P35251 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC1P35251 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.49■□□□□ 0.55
RFC1P35251 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.49■□□□□ 0.55
RFC1P35251 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFC1P35251 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RFC1P35251 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.48■□□□□ 0.55
RFC1P35251 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RFC1P35251 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.48■□□□□ 0.55
RFC1P35251 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RFC1P35251 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.48■□□□□ 0.55
RFC1P35251 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.48■□□□□ 0.55
RFC1P35251 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.48■□□□□ 0.55
RFC1P35251 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RFC1P35251 AC019129.2-201ENST00000609837 1235 ntBASIC18.48■□□□□ 0.55
RFC1P35251 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.48■□□□□ 0.55
RFC1P35251 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFC1P35251 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.48■□□□□ 0.55
RFC1P35251 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFC1P35251 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFC1P35251 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.48■□□□□ 0.55
RFC1P35251 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RFC1P35251 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.47■□□□□ 0.55
RFC1P35251 LINC00265-3P-201ENST00000447588 903 ntBASIC18.47■□□□□ 0.55
RFC1P35251 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.47■□□□□ 0.55
RFC1P35251 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.47■□□□□ 0.55
RFC1P35251 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFC1P35251 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms