Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCD3P28288 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.16■□□□□ 0.18
ABCD3P28288 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.15■□□□□ 0.18
ABCD3P28288 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.15■□□□□ 0.18
ABCD3P28288 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 AC003669.1-201ENST00000334569 611 ntBASIC16.15■□□□□ 0.18
ABCD3P28288 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.15■□□□□ 0.18
ABCD3P28288 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 TPM4P1-201ENST00000436100 807 ntBASIC16.15■□□□□ 0.18
ABCD3P28288 FAAHP1-202ENST00000446499 1238 ntBASIC16.15■□□□□ 0.18
ABCD3P28288 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.15■□□□□ 0.18
ABCD3P28288 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.15■□□□□ 0.18
ABCD3P28288 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.15■□□□□ 0.18
ABCD3P28288 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.15■□□□□ 0.18
ABCD3P28288 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ABCD3P28288 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ABCD3P28288 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ABCD3P28288 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ABCD3P28288 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ABCD3P28288 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.14■□□□□ 0.18
ABCD3P28288 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ABCD3P28288 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.14■□□□□ 0.17
ABCD3P28288 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.14■□□□□ 0.17
ABCD3P28288 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ABCD3P28288 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ABCD3P28288 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
ABCD3P28288 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 FGFR3P6-201ENST00000457012 610 ntBASIC16.14■□□□□ 0.17
ABCD3P28288 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.14■□□□□ 0.17
ABCD3P28288 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.14■□□□□ 0.17
ABCD3P28288 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.14■□□□□ 0.17
ABCD3P28288 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.14■□□□□ 0.17
ABCD3P28288 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.14■□□□□ 0.17
ABCD3P28288 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.14■□□□□ 0.17
ABCD3P28288 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ABCD3P28288 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ABCD3P28288 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD3P28288 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ABCD3P28288 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
ABCD3P28288 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 AC079776.2-201ENST00000641154 1609 ntBASIC16.13■□□□□ 0.17
ABCD3P28288 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 SPDYE21P-201ENST00000413323 827 ntBASIC16.13■□□□□ 0.17
ABCD3P28288 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 STK19B-204ENST00000512515 211 ntBASIC16.13■□□□□ 0.17
ABCD3P28288 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 AL121912.1-201ENST00000603683 238 ntBASIC16.13■□□□□ 0.17
ABCD3P28288 AL139327.4-201ENST00000612362 153 ntBASIC16.13■□□□□ 0.17
ABCD3P28288 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.13■□□□□ 0.17
ABCD3P28288 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD3P28288 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 LYSMD4-203ENST00000378904 2122 ntBASIC16.13■□□□□ 0.17
ABCD3P28288 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD3P28288 LINC00896-202ENST00000609602 2128 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms