Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 KSR1P1-201ENST00000446298 240 ntBASIC14.84□□□□□ -0.03
VAMP1P23763 AC008040.2-201ENST00000461049 708 ntBASIC14.84□□□□□ -0.03
VAMP1P23763 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.84□□□□□ -0.03
VAMP1P23763 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VAMP1P23763 AC009065.1-201ENST00000564055 1225 ntBASIC14.84□□□□□ -0.03
VAMP1P23763 RARRES2P6-201ENST00000567333 442 ntBASIC14.84□□□□□ -0.03
VAMP1P23763 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.84□□□□□ -0.03
VAMP1P23763 AC069544.1-201ENST00000609399 999 ntBASIC14.84□□□□□ -0.03
VAMP1P23763 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VAMP1P23763 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.84□□□□□ -0.03
VAMP1P23763 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.84□□□□□ -0.03
VAMP1P23763 AL024508.2-201ENST00000607749 1894 ntBASIC14.84□□□□□ -0.03
VAMP1P23763 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VAMP1P23763 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.84□□□□□ -0.03
VAMP1P23763 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VAMP1P23763 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.83□□□□□ -0.03
VAMP1P23763 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.83□□□□□ -0.03
VAMP1P23763 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VAMP1P23763 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.83□□□□□ -0.03
VAMP1P23763 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
VAMP1P23763 RN7SL832P-201ENST00000607781 1756 ntBASIC14.83□□□□□ -0.03
VAMP1P23763 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.83□□□□□ -0.03
VAMP1P23763 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.83□□□□□ -0.04
VAMP1P23763 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.83□□□□□ -0.04
VAMP1P23763 AC026271.3-201ENST00000571884 352 ntBASIC14.83□□□□□ -0.04
VAMP1P23763 MIR5787-201ENST00000611784 55 ntBASIC14.83□□□□□ -0.04
VAMP1P23763 LINC01451-201ENST00000623792 534 ntBASIC14.83□□□□□ -0.04
VAMP1P23763 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 AL031985.4-201ENST00000642138 673 ntBASIC14.83□□□□□ -0.04
VAMP1P23763 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VAMP1P23763 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.83□□□□□ -0.04
VAMP1P23763 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
VAMP1P23763 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 KRT16P1-201ENST00000399124 1418 ntBASIC14.83□□□□□ -0.04
VAMP1P23763 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.83□□□□□ -0.04
VAMP1P23763 AL365209.1-201ENST00000624418 6473 ntBASIC14.83□□□□□ -0.04
VAMP1P23763 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VAMP1P23763 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VAMP1P23763 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 AC132938.6-201ENST00000623828 1655 ntBASIC14.82□□□□□ -0.04
VAMP1P23763 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VAMP1P23763 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VAMP1P23763 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VAMP1P23763 UNC93B5-201ENST00000530315 699 ntBASIC14.82□□□□□ -0.04
VAMP1P23763 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.82□□□□□ -0.04
VAMP1P23763 AL137784.2-201ENST00000607332 1000 ntBASIC14.82□□□□□ -0.04
VAMP1P23763 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VAMP1P23763 AC116407.2-201ENST00000613639 860 ntBASIC14.82□□□□□ -0.04
VAMP1P23763 MIR600HG-201ENST00000449175 5984 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms