Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.29■■□□□ 1
KCNA3P22001 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
KCNA3P22001 PIN1P1-201ENST00000412108 996 ntBASIC21.29■■□□□ 1
KCNA3P22001 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.29■■□□□ 1
KCNA3P22001 ARSEP1-201ENST00000420443 635 ntBASIC21.29■■□□□ 1
KCNA3P22001 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 RN7SL692P-201ENST00000464677 288 ntBASIC21.29■■□□□ 1
KCNA3P22001 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.29■■□□□ 1
KCNA3P22001 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.29■■□□□ 1
KCNA3P22001 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNA3P22001 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 AL096828.2-201ENST00000567259 1965 ntBASIC21.28■■□□□ 1
KCNA3P22001 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
KCNA3P22001 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.28■■□□□ 1
KCNA3P22001 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
KCNA3P22001 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.28■■□□□ 1
KCNA3P22001 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 SPDYE7P-202ENST00000420373 878 ntBASIC21.28■■□□□ 1
KCNA3P22001 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 KRT8P23-201ENST00000560090 1207 ntBASIC21.28■■□□□ 1
KCNA3P22001 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KCNA3P22001 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
KCNA3P22001 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNA3P22001 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KCNA3P22001 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KCNA3P22001 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KCNA3P22001 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.27■■□□□ 1
KCNA3P22001 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.27■■□□□ 1
KCNA3P22001 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 MYCLP1-201ENST00000372451 1075 ntBASIC21.27■■□□□ 1
KCNA3P22001 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.27■■□□□ 1
KCNA3P22001 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.27■■□□□ 1
KCNA3P22001 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.27■■□□□ 1
KCNA3P22001 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.27■■□□□ 1
KCNA3P22001 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.27■■□□□ 1
KCNA3P22001 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.27■■□□□ 1
KCNA3P22001 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.27■■□□□ 1
KCNA3P22001 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNA3P22001 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KCNA3P22001 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.26■□□□□ 0.99
KCNA3P22001 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
KCNA3P22001 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.26■□□□□ 0.99
KCNA3P22001 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
KCNA3P22001 UXT-AS1-201ENST00000590504 1525 ntBASIC21.26■□□□□ 0.99
KCNA3P22001 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KCNA3P22001 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 U91328.1-201ENST00000437528 223 ntBASIC21.26■□□□□ 0.99
KCNA3P22001 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.26■□□□□ 0.99
KCNA3P22001 MIR4515-201ENST00000584082 81 ntBASIC21.26■□□□□ 0.99
KCNA3P22001 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.26■□□□□ 0.99
KCNA3P22001 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
KCNA3P22001 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms