Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ERCC2P18074 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.03■□□□□ 0.48
ERCC2P18074 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC2P18074 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ERCC2P18074 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.03■□□□□ 0.48
ERCC2P18074 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.03■□□□□ 0.48
ERCC2P18074 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.03■□□□□ 0.48
ERCC2P18074 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC2P18074 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.03■□□□□ 0.48
ERCC2P18074 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ERCC2P18074 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC2P18074 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.03■□□□□ 0.48
ERCC2P18074 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ERCC2P18074 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ERCC2P18074 AL023806.1-201ENST00000603994 1649 ntBASIC18.02■□□□□ 0.48
ERCC2P18074 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ERCC2P18074 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ERCC2P18074 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC2P18074 PMPCAP1-201ENST00000508114 1576 ntBASIC18.02■□□□□ 0.48
ERCC2P18074 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.02■□□□□ 0.48
ERCC2P18074 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
ERCC2P18074 PRELID1P1-202ENST00000567272 903 ntBASIC18.02■□□□□ 0.48
ERCC2P18074 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 AC073592.5-201ENST00000624854 528 ntBASIC18.02■□□□□ 0.48
ERCC2P18074 AP000867.4-201ENST00000641616 219 ntBASIC18.02■□□□□ 0.48
ERCC2P18074 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ERCC2P18074 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.02■□□□□ 0.47
ERCC2P18074 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC2P18074 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC2P18074 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC2P18074 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC2P18074 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC2P18074 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.02■□□□□ 0.47
ERCC2P18074 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC2P18074 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ERCC2P18074 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERCC2P18074 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC2P18074 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC2P18074 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.01■□□□□ 0.47
ERCC2P18074 ABCD1P5-201ENST00000445663 754 ntBASIC18.01■□□□□ 0.47
ERCC2P18074 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ERCC2P18074 AC132008.2-207ENST00000454517 770 ntBASIC18.01■□□□□ 0.47
ERCC2P18074 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC2P18074 KRT18P56-201ENST00000507275 550 ntBASIC18.01■□□□□ 0.47
ERCC2P18074 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC2P18074 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.01■□□□□ 0.47
ERCC2P18074 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.01■□□□□ 0.47
ERCC2P18074 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ERCC2P18074 CLEC4GP1-201ENST00000596555 870 ntBASIC18.01■□□□□ 0.47
ERCC2P18074 AL121772.3-201ENST00000610840 674 ntBASIC18.01■□□□□ 0.47
ERCC2P18074 AC012313.10-201ENST00000623509 926 ntBASIC18.01■□□□□ 0.47
ERCC2P18074 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC2P18074 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ERCC2P18074 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC2P18074 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC2P18074 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ERCC2P18074 AC046185.3-201ENST00000623228 1824 ntBASIC18■□□□□ 0.47
ERCC2P18074 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC2P18074 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ERCC2P18074 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms