Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PDGFRAP16234 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFRAP16234 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFRAP16234 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.41■□□□□ 0.54
PDGFRAP16234 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.41■□□□□ 0.54
PDGFRAP16234 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDGFRAP16234 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PDGFRAP16234 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFRAP16234 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PDGFRAP16234 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.4■□□□□ 0.54
PDGFRAP16234 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDGFRAP16234 AL049757.1-201ENST00000616842 1596 ntBASIC18.4■□□□□ 0.54
PDGFRAP16234 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDGFRAP16234 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.4■□□□□ 0.54
PDGFRAP16234 RCN1P2-201ENST00000398357 915 ntBASIC18.4■□□□□ 0.54
PDGFRAP16234 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 AL139327.4-201ENST00000612362 153 ntBASIC18.4■□□□□ 0.54
PDGFRAP16234 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.4■□□□□ 0.54
PDGFRAP16234 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFRAP16234 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDGFRAP16234 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 CROCCP2-202ENST00000412962 2773 ntBASIC18.4■□□□□ 0.54
PDGFRAP16234 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.4■□□□□ 0.54
PDGFRAP16234 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDGFRAP16234 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDGFRAP16234 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PDGFRAP16234 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDGFRAP16234 AL645608.8-201ENST00000606034 2086 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDGFRAP16234 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 NUS1P2-201ENST00000417358 873 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 POM121L3P-201ENST00000419331 1163 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFRAP16234 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFRAP16234 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.39■□□□□ 0.53
PDGFRAP16234 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.39■□□□□ 0.53
PDGFRAP16234 AL121894.2-201ENST00000602977 491 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 AL121772.3-201ENST00000610840 674 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.39■□□□□ 0.53
PDGFRAP16234 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.39■□□□□ 0.53
PDGFRAP16234 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDGFRAP16234 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 KRT8P10-201ENST00000450021 1447 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 INTS4P1-201ENST00000438455 1935 ntBASIC18.39■□□□□ 0.53
PDGFRAP16234 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.39■□□□□ 0.53
PDGFRAP16234 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDGFRAP16234 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDGFRAP16234 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.38■□□□□ 0.53
PDGFRAP16234 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.38■□□□□ 0.53
PDGFRAP16234 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDGFRAP16234 MYCLP1-201ENST00000372451 1075 ntBASIC18.38■□□□□ 0.53
PDGFRAP16234 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.38■□□□□ 0.53
PDGFRAP16234 TSPY19P-201ENST00000418461 509 ntBASIC18.38■□□□□ 0.53
PDGFRAP16234 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFRAP16234 TSPY18P-201ENST00000441642 509 ntBASIC18.38■□□□□ 0.53
PDGFRAP16234 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.38■□□□□ 0.53
PDGFRAP16234 UNC93B7-201ENST00000509439 705 ntBASIC18.38■□□□□ 0.53
PDGFRAP16234 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms