Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 AC096633.1-201ENST00000422446 749 ntBASIC18.99■□□□□ 0.63
CCDC172P0C7W6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.99■□□□□ 0.63
CCDC172P0C7W6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 LINC01311-201ENST00000565162 1445 ntBASIC18.99■□□□□ 0.63
CCDC172P0C7W6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 AC097374.2-201ENST00000618617 1306 ntBASIC18.99■□□□□ 0.63
CCDC172P0C7W6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC172P0C7W6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 LINC01238-205ENST00000567549 1107 ntBASIC18.98■□□□□ 0.63
CCDC172P0C7W6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC172P0C7W6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 KRT18P57-201ENST00000443599 1254 ntBASIC18.97■□□□□ 0.63
CCDC172P0C7W6 KRT18P38-201ENST00000449496 1282 ntBASIC18.97■□□□□ 0.63
CCDC172P0C7W6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 AL390719.2-201ENST00000606993 987 ntBASIC18.97■□□□□ 0.63
CCDC172P0C7W6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC172P0C7W6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms